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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037199 through 18771 annotations produced 1 hits



(CG11137):

Annotation Number : CG11137
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037199
Gbrowse : chr3L:22860582-22861334 (-) // 100.0 //
Probeset : 1631775_at
Accessions : protein= NP_649424;, nucleotide= NM_141167;
FlyMine data for FBgn0037199.
BDGP gene expression has embryonic in situ data for CG11137: 4 pix of staining in 1 body parts.
VDRC has 4 RNAi stocks for FBgn0037199 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain791 194 of 4 0.90None
Head972 344 of 4 1.20Up
Eye1542 484 of 4 1.83Up
Thoracicoabdominal ganglion844 314 of 4 1.00None
Salivary gland927 124 of 4 1.10Up
Crop1070 364 of 4 1.30Up
Midgut566 174 of 4 0.70Down
Tubule439 114 of 4 0.50Down
Hindgut803 134 of 4 1.00None
Heart983 34 of 4 1.17Up
Fat body965 364 of 4 1.15Up
Ovary927 34 of 4 1.10Up
Testis637 244 of 4 0.80Down
Male accessory glands704 284 of 4 0.80Down
Virgin spermatheca625 414 of 4 0.74Down
Mated spermatheca637 274 of 4 0.76Down
Adult carcass760 264 of 4 0.90Down
Larval CNS537 134 of 4 0.64Down
Larval Salivary gland544 154 of 4 0.65Down
Larval midgut327 214 of 4 0.39Down
Larval tubule597 164 of 4 0.70Down
Larval hindgut429 74 of 4 0.51Down
Larval fat body626 354 of 4 0.70Down
Larval trachea489 484 of 4 0.58Down
Larval carcass359 184 of 4 0.43Down
S2 cells (growing)592 174 of 4 0.70Down
Whole fly841 154 of 4

Looking for FBgn0037199. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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