FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0037200 through 18771 annotations produced 1 hits

(CG11109):

Annotation Number : CG11109
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037200
Gbrowse : chr3L:22865305-22866823 (+) // 100.0 //
Probeset : 1636476_a_at
Accessions : protein= NP_649425; /// NP_730761;, nucleotide= NM_141168; /// NM_168974;
Pathway : 0005730 // nucleolus // inferred from sequence or structural similarity
Interpro : 0003723 // RNA binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from
FlyMine data for FBgn0037200.
BDGP gene expression has embryonic in situ data for CG11109: 4 pix of staining in 1 body parts.
BioGrid reports that CG11109 interacts with CG11466 .
VDRC has 2 RNAi stocks for FBgn0037200 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	57 ± 2	4 of 4	0.80	Down
Head	60 ± 4	4 of 4	0.80	None
Eye	50 ± 1	4 of 4	0.69	Down
Thoracicoabdominal ganglion	78 ± 3	4 of 4	1.10	None
Salivary gland	160 ± 4	4 of 4	2.18	Up
Crop	71 ± 5	4 of 4	1.00	None
Midgut	74 ± 7	4 of 4	1.00	None
Tubule	65 ± 3	4 of 4	0.90	Down
Hindgut	59 ± 1	4 of 4	0.80	None
Heart	54 ± 2	4 of 4	0.74	Down
Fat body	88 ± 11	4 of 4	1.20	None
Ovary	136 ± 5	4 of 4	1.80	Up
Testis	14 ± 1	4 of 4	0.20	Down
Male accessory glands	162 ± 5	4 of 4	2.20	Up
Virgin spermatheca	82 ± 3	4 of 4	1.12	None
Mated spermatheca	100 ± 9	4 of 4	1.36	None
Adult carcass	55 ± 4	4 of 4	0.70	Down
Larval CNS	106 ± 10	4 of 4	1.45	Up
Larval Salivary gland	185 ± 5	4 of 4	2.52	Up
Larval midgut	63 ± 3	4 of 4	0.86	None
Larval tubule	88 ± 5	4 of 4	1.20	None
Larval hindgut	76 ± 3	4 of 4	1.03	None
Larval fat body	73 ± 5	4 of 4	1.00	None
Larval trachea	87 ± 7	4 of 4	1.18	None
Larval carcass	98 ± 4	4 of 4	1.33	Up
S2 cells (growing)	152 ± 2	4 of 4	2.07	Up
Whole fly	73 ± 4	4 of 4

Looking for FBgn0037200. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720