FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0037202 through 18771 annotations produced 1 hits

Ssl1 (Ssl1):

Annotation Number : CG11115
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037202
Gbrowse : chr3L:22872188-22874067 (+) // 100.0 //
Probeset : 1638161_at
Accessions : protein= NP_649427;, nucleotide= NM_141170;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annot
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electr
FlyMine data for FBgn0037202.
BDGP gene expression has embryonic in situ data for Ssl1: 4 pix of staining in 1 body parts.
BioGrid reports that CG11115 interacts with CG7347 .
TRiP has 1 RNAi stocks for FBgn0037202 available for purchase.
VDRC has 3 RNAi stocks for FBgn0037202 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	129 ± 2	4 of 4	0.80	Down
Head	69 ± 6	4 of 4	0.50	Down
Eye	43 ± 4	4 of 4	0.28	Down
Thoracicoabdominal ganglion	123 ± 4	4 of 4	0.80	Down
Salivary gland	52 ± 3	4 of 4	0.34	Down
Crop	78 ± 3	4 of 4	0.50	Down
Midgut	58 ± 3	4 of 4	0.40	Down
Tubule	86 ± 3	4 of 4	0.60	Down
Hindgut	72 ± 3	4 of 4	0.50	Down
Heart	56 ± 2	4 of 4	0.37	Down
Fat body	64 ± 5	4 of 4	0.42	Down
Ovary	250 ± 5	4 of 4	1.60	Up
Testis	122 ± 3	4 of 4	0.80	Down
Male accessory glands	127 ± 10	4 of 4	0.80	None
Virgin spermatheca	76 ± 4	4 of 4	0.50	Down
Mated spermatheca	93 ± 2	4 of 4	0.61	Down
Adult carcass	58 ± 6	4 of 4	0.40	Down
Larval CNS	246 ± 20	4 of 4	1.60	Up
Larval Salivary gland	201 ± 8	4 of 4	1.31	Up
Larval midgut	52 ± 1	4 of 4	0.34	Down
Larval tubule	76 ± 2	4 of 4	0.50	Down
Larval hindgut	104 ± 3	4 of 4	0.68	Down
Larval fat body	60 ± 2	4 of 4	0.40	Down
Larval trachea	205 ± 15	4 of 4	1.34	Up
Larval carcass	129 ± 2	4 of 4	0.84	Down
S2 cells (growing)	191 ± 5	4 of 4	1.24	Up
Whole fly	153 ± 6	4 of 4

Looking for FBgn0037202. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720