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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037206 through 18771 annotations produced 1 hits



(CG12768):

Annotation Number : CG12768
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037206
Gbrowse : chr3L:22903590-22916632 (+) // 100.0 //
Probeset : 1638198_at
Accessions : protein= NP_649431;, nucleotide= NM_141174;
FlyMine data for FBgn0037206.
BioGrid reports that CG12768 interacts with CG14546 CG17051 CG3193 CG6203 CG7716 CG9573 .
TRiP has 1 RNAi stocks for FBgn0037206 available for purchase.
VDRC has 3 RNAi stocks for FBgn0037206 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain120 ± 34 of 413.80Up
Head30 ± 04 of 4 3.50Up
Eye10 ± 13 of 4 1.19None
Thoracicoabdominal ganglion118 ± 24 of 413.50Up
Salivary gland4 ± 10 of 4 0.48None
Crop13 ± 21 of 4 1.60None
Midgut5 ± 10 of 4 0.60None
Tubule3 ± 00 of 4 0.40Down
Hindgut7 ± 01 of 4 0.80None
Heart16 ± 14 of 4 1.89Up
Fat body9 ± 40 of 4 1.10None
Ovary3 ± 00 of 4 0.40None
Testis5 ± 11 of 4 0.70None
Male accessory glands4 ± 10 of 4 0.50None
Virgin spermatheca3 ± 10 of 4 0.36None
Mated spermatheca3 ± 00 of 4 0.40None
Adult carcass6 ± 00 of 4 0.70None
Larval CNS179 ± 104 of 420.52Up
Larval Salivary gland4 ± 10 of 4 0.52None
Larval midgut9 ± 10 of 4 1.07None
Larval tubule7 ± 22 of 4 0.80None
Larval hindgut4 ± 11 of 4 0.53None
Larval fat body21 ± 04 of 4 2.40Up
Larval trachea5 ± 31 of 4 0.57None
Larval carcass8 ± 13 of 4 1.01None
S2 cells (growing)218 ± 64 of 425.02Up
Whole fly8 ± 11 of 4

Looking for FBgn0037206. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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