FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0037207 through 18771 annotations produced 2 hits

Mes2 (Mes2):

Annotation Number : CG11100
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037207
Gbrowse : chr3L:22938758-22945346 (+) // 100.0 //
Probeset : 1632548_a_at
Accessions : protein= NP_730768; /// NP_730769;, nucleotide= NM_168979; /// NM_168980;
Pathway : chitin-based cuticle // inferred from mutant phenotype"
Interpro : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement
FlyMine data for FBgn0037207.
BDGP gene expression has embryonic in situ data for CG11100: 117 pix of staining in 42 body parts.
BioGrid reports that CG11100 interacts with CG11768 CG14904 CG15564 CG3081 CG31033 CG4087 CG6517 CG6707 CG7641 .
TRiP has 1 RNAi stocks for FBgn0037207 available for purchase.
VDRC has 2 RNAi stocks for FBgn0037207 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	121 ± 8	4 of 4	0.90	None
Head	130 ± 14	4 of 4	1.00	None
Eye	59 ± 4	4 of 4	0.45	Down
Thoracicoabdominal ganglion	186 ± 8	4 of 4	1.40	Up
Salivary gland	13 ± 2	1 of 4	0.10	Down
Crop	9 ± 1	3 of 4	0.10	Down
Midgut	55 ± 3	4 of 4	0.40	Down
Tubule	12 ± 2	3 of 4	0.10	Down
Hindgut	19 ± 1	4 of 4	0.10	Down
Heart	276 ± 22	4 of 4	2.08	Up
Fat body	530 ± 49	4 of 4	3.99	Up
Ovary	391 ± 7	4 of 4	2.90	Up
Testis	7 ± 0	4 of 4	0.10	Down
Male accessory glands	8 ± 2	2 of 4	0.10	Down
Virgin spermatheca	374 ± 33	4 of 4	2.82	Up
Mated spermatheca	390 ± 30	4 of 4	2.94	Up
Adult carcass	174 ± 11	4 of 4	1.30	Up
Larval CNS	717 ± 91	4 of 4	5.40	Up
Larval Salivary gland	7 ± 0	3 of 4	0.05	Down
Larval midgut	67 ± 9	4 of 4	0.51	Down
Larval tubule	22 ± 2	4 of 4	0.20	Down
Larval hindgut	70 ± 6	4 of 4	0.53	Down
Larval fat body	858 ± 75	4 of 4	6.50	Up
Larval trachea	14 ± 5	4 of 4	0.11	Down
Larval carcass	71 ± 5	4 of 4	0.54	Down
S2 cells (growing)	1416 ± 46	4 of 4	10.66	Up
Whole fly	132 ± 6	4 of 4

Mes2 (Mes2):

Annotation Number : CG11100
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse : chr3L:22938313-22940751 (+) // 100.0 //
Probeset : 1629237_at
Accessions : protein= NP_730768; /// NP_730769;, nucleotide= NM_168979; /// NM_168980;
Pathway : chitin-based cuticle // inferred from mutant phenotype"
Interpro : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement
BioGrid reports that CG11100 interacts with CG11768 CG14904 CG15564 CG3081 CG31033 CG4087 CG6517 CG6707 CG7641 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	0.70	None
Head	4 ± 0	0 of 4	1.60	None
Eye	1 ± 0	0 of 4	0.47	None
Thoracicoabdominal ganglion	4 ± 0	1 of 4	1.50	None
Salivary gland	11 ± 6	1 of 4	4.03	None
Crop	3 ± 1	0 of 4	1.20	None
Midgut	2 ± 1	0 of 4	0.70	None
Tubule	4 ± 0	0 of 4	1.60	Up
Hindgut	6 ± 2	2 of 4	2.30	None
Heart	1 ± 0	0 of 4	0.61	None
Fat body	7 ± 2	2 of 4	2.68	Up
Ovary	1 ± 0	0 of 4	0.60	None
Testis	0 ± 0	0 of 4	0.30	None
Male accessory glands	5 ± 0	0 of 4	1.90	None
Virgin spermatheca	8 ± 0	2 of 4	2.98	Up
Mated spermatheca	5 ± 1	0 of 4	1.80	None
Adult carcass	6 ± 2	0 of 4	2.10	None
Larval CNS	3 ± 1	1 of 4	1.36	None
Larval Salivary gland	4 ± 1	0 of 4	1.60	None
Larval midgut	6 ± 1	0 of 4	2.14	None
Larval tubule	4 ± 1	1 of 4	1.50	None
Larval hindgut	2 ± 0	1 of 4	0.98	None
Larval fat body	7 ± 1	0 of 4	2.60	None
Larval trachea	0 ± 0	0 of 4	0.18	None
Larval carcass	4 ± 1	0 of 4	1.48	None
S2 cells (growing)	7 ± 0	3 of 4	2.59	Up
Whole fly	2 ± 0	0 of 4

Looking for FBgn0037207. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720