FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0037217 through 18771 annotations produced 1 hits

(CG14636):

Annotation Number : CG14636
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037217
Gbrowse : chr3R:30206-41033 (-) // 100.0 //
Probeset : 1627636_at
Accessions : protein= NP_001036655; /// NP_649437;, nucleotide= NM_001043190; /// NM_141180;
FlyMine data for FBgn0037217.
BDGP gene expression has embryonic in situ data for CG14636: 21 pix of staining in 11 body parts.
VDRC has 3 RNAi stocks for FBgn0037217 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	21 ± 0	4 of 4	1.70	Up
Head	23 ± 3	3 of 4	1.90	Up
Eye	66 ± 7	4 of 4	5.24	Up
Thoracicoabdominal ganglion	7 ± 0	0 of 4	0.50	Down
Salivary gland	356 ± 32	4 of 4	28.09	Up
Crop	13 ± 0	1 of 4	1.10	None
Midgut	5 ± 2	0 of 4	0.40	Down
Tubule	47 ± 22	3 of 4	3.70	None
Hindgut	12 ± 1	0 of 4	1.00	None
Heart	23 ± 1	4 of 4	1.83	Up
Fat body	24 ± 1	4 of 4	1.95	Up
Ovary	11 ± 1	1 of 4	0.90	None
Testis	44 ± 5	4 of 4	3.50	Up
Male accessory glands	11 ± 4	0 of 4	0.90	None
Virgin spermatheca	5 ± 1	0 of 4	0.46	Down
Mated spermatheca	7 ± 3	0 of 4	0.57	None
Adult carcass	23 ± 3	0 of 4	1.80	Up
Larval CNS	18 ± 1	4 of 4	1.47	Up
Larval Salivary gland	491 ± 118	4 of 4	38.66	Up
Larval midgut	4 ± 0	0 of 4	0.34	Down
Larval tubule	100 ± 10	4 of 4	7.90	Up
Larval hindgut	141 ± 21	4 of 4	11.17	Up
Larval fat body	13 ± 3	0 of 4	1.00	None
Larval trachea	289 ± 95	4 of 4	22.78	Up
Larval carcass	33 ± 3	1 of 4	2.66	Up
S2 cells (growing)	22 ± 2	4 of 4	1.80	Up
Whole fly	12 ± 1	4 of 4

Looking for FBgn0037217. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720