Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037225 through 18771 annotations produced 1 hits



CG14643 (TwdlG):

Annotation Number : CG14643
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037225
Gbrowse : chr3R:74437-76518 (-) // 100.0 //
Probeset : 1630596_at
Accessions : protein= NP_649444;, nucleotide= NM_141187;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0037225.
BDGP gene expression has embryonic in situ data for CG14643: 11 pix of staining in 4 body parts.
BioGrid reports that CG14643 interacts with CG9776 CG14667 CG15482 CG4832 CG6569 .
VDRC has 2 RNAi stocks for FBgn0037225 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain166 ± 34 of 412.10Up
Head31 ± 24 of 4 2.30Up
Eye4 ± 00 of 4 0.32Down
Thoracicoabdominal ganglion477 ± 214 of 434.70Up
Salivary gland5 ± 30 of 4 0.43None
Crop4 ± 00 of 4 0.30Down
Midgut3 ± 10 of 4 0.30Down
Tubule2 ± 00 of 4 0.20Down
Hindgut3 ± 00 of 4 0.30Down
Heart8 ± 12 of 4 0.59None
Fat body16 ± 14 of 4 1.17None
Ovary1 ± 00 of 4 0.10Down
Testis2 ± 10 of 4 0.10Down
Male accessory glands3 ± 10 of 4 0.30Down
Virgin spermatheca8 ± 21 of 4 0.64None
Mated spermatheca10 ± 12 of 4 0.78None
Adult carcass7 ± 20 of 4 0.50None
Larval CNS4 ± 01 of 4 0.32Down
Larval Salivary gland3 ± 10 of 4 0.24Down
Larval midgut24 ± 44 of 4 1.75None
Larval tubule14 ± 22 of 4 1.00None
Larval hindgut2 ± 00 of 4 0.17Down
Larval fat body6 ± 20 of 4 0.50None
Larval trachea5 ± 11 of 4 0.43Down
Larval carcass19 ± 34 of 4 1.41None
S2 cells (growing)2 ± 10 of 4 0.16Down
Whole fly13 ± 24 of 4

Looking for FBgn0037225. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime