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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037241 through 18771 annotations produced 1 hits



(CG14646):

Annotation Number : CG14646
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037241
Gbrowse : chr3R:216096-217839 (+) // 100.0 //
Probeset : 1634377_at
Accessions : protein= NP_649462;, nucleotide= NM_141205;
FlyMine data for FBgn0037241.
VDRC has 1 RNAi stocks for FBgn0037241 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain97 ± 14 of 4 0.80Down
Head98 ± 44 of 4 0.80Down
Eye163 ± 54 of 4 1.33Up
Thoracicoabdominal ganglion106 ± 34 of 4 0.90Down
Salivary gland283 ± 254 of 4 2.31Up
Crop184 ± 74 of 4 1.50Up
Midgut178 ± 64 of 4 1.50Up
Tubule124 ± 64 of 4 1.00None
Hindgut129 ± 24 of 4 1.10None
Heart140 ± 74 of 4 1.15None
Fat body164 ± 134 of 4 1.34Up
Ovary248 ± 34 of 4 2.00Up
Testis57 ± 14 of 4 0.50Down
Male accessory glands233 ± 84 of 4 1.90Up
Virgin spermatheca136 ± 34 of 4 1.11Up
Mated spermatheca168 ± 44 of 4 1.37Up
Adult carcass119 ± 74 of 4 1.00None
Larval CNS221 ± 144 of 4 1.81Up
Larval Salivary gland475 ± 144 of 4 3.87Up
Larval midgut348 ± 204 of 4 2.83Up
Larval tubule150 ± 74 of 4 1.20Up
Larval hindgut180 ± 84 of 4 1.47Up
Larval fat body236 ± 104 of 4 1.90Up
Larval trachea235 ± 174 of 4 1.92Up
Larval carcass150 ± 74 of 4 1.23Up
S2 cells (growing)421 ± 94 of 4 3.43Up
Whole fly122 ± 14 of 4

Looking for FBgn0037241. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime