FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0037248 through 18771 annotations produced 1 hits

Spargel (Spargel):

Annotation Number : CG9809
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037248
Gbrowse : chr3R:248205-255054 (-) // 100.0 //
Probeset : 1631087_a_at
Accessions : protein= NP_730835; /// NP_730836;, nucleotide= NM_168996; /// NM_168997;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred fro
FlyMine data for FBgn0037248.
BDGP gene expression has embryonic in situ data for CG9809: 13 pix of staining in 16 body parts.
TRiP has 3 RNAi stocks for FBgn0037248 available for purchase.
VDRC has 1 RNAi stocks for FBgn0037248 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	66 ± 4	4 of 4	0.40	Down
Head	62 ± 5	4 of 4	0.30	Down
Eye	32 ± 5	4 of 4	0.18	Down
Thoracicoabdominal ganglion	64 ± 2	4 of 4	0.40	Down
Salivary gland	49 ± 8	4 of 4	0.27	Down
Crop	84 ± 2	4 of 4	0.50	Down
Midgut	75 ± 2	4 of 4	0.40	Down
Tubule	48 ± 11	4 of 4	0.30	Down
Hindgut	35 ± 1	4 of 4	0.20	Down
Heart	45 ± 3	4 of 4	0.25	Down
Fat body	127 ± 14	4 of 4	0.69	Down
Ovary	486 ± 12	4 of 4	2.70	Up
Testis	16 ± 1	4 of 4	0.10	Down
Male accessory glands	108 ± 4	4 of 4	0.60	Down
Virgin spermatheca	118 ± 11	4 of 4	0.65	Down
Mated spermatheca	187 ± 4	4 of 4	1.02	None
Adult carcass	54 ± 4	4 of 4	0.30	Down
Larval CNS	413 ± 32	4 of 4	2.26	Up
Larval Salivary gland	176 ± 15	4 of 4	0.97	None
Larval midgut	72 ± 8	4 of 4	0.39	Down
Larval tubule	14 ± 0	3 of 4	0.10	Down
Larval hindgut	103 ± 19	4 of 4	0.57	Down
Larval fat body	31 ± 3	4 of 4	0.20	Down
Larval trachea	166 ± 38	4 of 4	0.91	None
Larval carcass	196 ± 48	4 of 4	1.07	None
S2 cells (growing)	190 ± 12	4 of 4	1.04	None
Whole fly	183 ± 10	4 of 4

Looking for FBgn0037248. 1 entries matched from 18771, in 2 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720