Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037250 through 18771 annotations produced 1 hits



(CG1074):

Annotation Number : CG1074
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037250
Gbrowse : chr3R:259730-261921 (+) // 100.0 //
Probeset : 1627676_at
Accessions : protein= NP_649471;, nucleotide= NM_141214;
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // infe
FlyMine data for FBgn0037250.
BDGP gene expression has embryonic in situ data for CG1074: 10 pix of staining in 10 body parts.
VDRC has 2 RNAi stocks for FBgn0037250 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain146 ± 14 of 4 0.80Down
Head89 ± 24 of 4 0.50Down
Eye70 ± 24 of 4 0.40Down
Thoracicoabdominal ganglion137 ± 14 of 4 0.80Down
Salivary gland82 ± 54 of 4 0.46Down
Crop133 ± 44 of 4 0.80Down
Midgut86 ± 84 of 4 0.50Down
Tubule87 ± 44 of 4 0.50Down
Hindgut82 ± 14 of 4 0.50Down
Heart97 ± 44 of 4 0.55Down
Fat body109 ± 54 of 4 0.62Down
Ovary367 ± 34 of 4 2.10Up
Testis40 ± 24 of 4 0.20Down
Male accessory glands190 ± 114 of 4 1.10None
Virgin spermatheca69 ± 34 of 4 0.39Down
Mated spermatheca89 ± 54 of 4 0.50Down
Adult carcass82 ± 34 of 4 0.50Down
Larval CNS131 ± 84 of 4 0.74Down
Larval Salivary gland87 ± 54 of 4 0.49Down
Larval midgut61 ± 24 of 4 0.35Down
Larval tubule52 ± 14 of 4 0.30Down
Larval hindgut72 ± 54 of 4 0.41Down
Larval fat body53 ± 34 of 4 0.30Down
Larval trachea138 ± 194 of 4 0.78Down
Larval carcass92 ± 114 of 4 0.52Down
S2 cells (growing)111 ± 34 of 4 0.63Down
Whole fly177 ± 54 of 4

Looking for FBgn0037250. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime