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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037260 through 18771 annotations produced 1 hits



Mucin related 82C (Mur82C):

Annotation Number : CG12586
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037260
Gbrowse : chr3R:367257-368937 (+) // 100.0 //
Probeset : 1624442_at
Accessions : protein= NP_649481;, nucleotide= NM_141224;
FlyMine data for FBgn0037260.
VDRC has 2 RNAi stocks for FBgn0037260 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 00 of 4 0.10Down
Head1 ± 00 of 4 0.10Down
Eye3 ± 10 of 4 0.20Down
Thoracicoabdominal ganglion2 ± 00 of 4 0.10Down
Salivary gland9 ± 11 of 4 0.58Down
Crop6 ± 11 of 4 0.40Down
Midgut4 ± 10 of 4 0.30Down
Tubule2 ± 00 of 4 0.20Down
Hindgut2 ± 00 of 4 0.10Down
Heart2 ± 10 of 4 0.18Down
Fat body6 ± 32 of 4 0.39Down
Ovary1 ± 10 of 4 0.10Down
Testis4 ± 02 of 4 0.30Down
Male accessory glands1063 ± 264 of 465.60Up
Virgin spermatheca3 ± 00 of 4 0.22Down
Mated spermatheca6 ± 21 of 4 0.41Down
Adult carcass9 ± 10 of 4 0.60Down
Larval CNS3 ± 10 of 4 0.23Down
Larval Salivary gland5 ± 10 of 4 0.33Down
Larval midgut4 ± 10 of 4 0.28Down
Larval tubule3 ± 00 of 4 0.20Down
Larval hindgut1 ± 00 of 4 0.11Down
Larval fat body1 ± 00 of 4 0.10Down
Larval trachea3 ± 10 of 4 0.19Down
Larval carcass3 ± 10 of 4 0.23Down
S2 cells (growing)4 ± 00 of 4 0.29Down
Whole fly16 ± 14 of 4

Looking for FBgn0037260. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime