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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037261 through 18771 annotations produced 1 hits



(CG9775):

Annotation Number : CG9775
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037261
Gbrowse : chr3R:463725-467273 (-) // 100.0 //
Probeset : 1630470_s_at
Accessions : protein= NP_001163507; /// NP_649482; /// NP_730860;, nucleotide= NM_001170036; /// NM_141225; /// NM_169012;
Pathway : DNA-dependent // inferred from electronic annotation"
FlyMine data for FBgn0037261.
TRiP has 1 RNAi stocks for FBgn0037261 available for purchase.
VDRC has 1 RNAi stocks for FBgn0037261 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1001 ± 174 of 4 2.30Up
Head432 ± 174 of 4 1.00None
Eye443 ± 164 of 4 1.00None
Thoracicoabdominal ganglion887 ± 314 of 4 2.00Up
Salivary gland761 ± 334 of 4 1.72Up
Crop619 ± 114 of 4 1.40Up
Midgut265 ± 94 of 4 0.60Down
Tubule486 ± 284 of 4 1.10None
Hindgut381 ± 94 of 4 0.90None
Heart492 ± 274 of 4 1.11None
Fat body313 ± 224 of 4 0.71Down
Ovary643 ± 44 of 4 1.40Up
Testis195 ± 54 of 4 0.40Down
Male accessory glands556 ± 114 of 4 1.30Up
Virgin spermatheca798 ± 424 of 4 1.80Up
Mated spermatheca810 ± 184 of 4 1.83Up
Adult carcass492 ± 304 of 4 1.10None
Larval CNS765 ± 154 of 4 1.73Up
Larval Salivary gland733 ± 374 of 4 1.65Up
Larval midgut219 ± 104 of 4 0.49Down
Larval tubule460 ± 54 of 4 1.00None
Larval hindgut406 ± 184 of 4 0.92None
Larval fat body348 ± 104 of 4 0.80Down
Larval trachea432 ± 314 of 4 0.98None
Larval carcass414 ± 74 of 4 0.93None
S2 cells (growing)494 ± 54 of 4 1.11None
Whole fly443 ± 254 of 4

Looking for FBgn0037261. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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