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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037263 through 18771 annotations produced 1 hits



(CG18271):

Annotation Number : CG18271
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037263
Gbrowse : chr3R:469221-470146 (+) // 100.0 //
Probeset : 1632047_at
Accessions : protein= NP_649484;, nucleotide= NM_141227;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annot
Interpro : 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred fro
FlyMine data for FBgn0037263.
BioGrid reports that CG18271 interacts with CG3611 .
TRiP has 2 RNAi stocks for FBgn0037263 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain9 11 of 4 0.40Down
Head11 10 of 4 0.50Down
Eye10 11 of 4 0.47Down
Thoracicoabdominal ganglion7 20 of 4 0.40Down
Salivary gland17 41 of 4 0.79None
Crop19 14 of 4 0.90None
Midgut6 20 of 4 0.30Down
Tubule14 11 of 4 0.60Down
Hindgut13 02 of 4 0.60Down
Heart8 11 of 4 0.39Down
Fat body9 10 of 4 0.44Down
Ovary40 14 of 4 1.80Up
Testis10 13 of 4 0.50Down
Male accessory glands11 20 of 4 0.50Down
Virgin spermatheca9 30 of 4 0.41Down
Mated spermatheca5 10 of 4 0.25Down
Adult carcass21 40 of 4 1.00None
Larval CNS17 34 of 4 0.82None
Larval Salivary gland9 00 of 4 0.43Down
Larval midgut4 20 of 4 0.19Down
Larval tubule10 10 of 4 0.50Down
Larval hindgut6 11 of 4 0.30Down
Larval fat body13 11 of 4 0.60Down
Larval trachea16 23 of 4 0.74Down
Larval carcass11 20 of 4 0.51Down
S2 cells (growing)9 12 of 4 0.43Down
Whole fly22 13 of 4

Looking for FBgn0037263. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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