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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0037282 through 18771 annotations produced 1 hits


Annotation Number : CG14657
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037282
Gbrowse : chr3R:644019-647150 (-) // 100.0 //
Probeset : 1629252_at
Accessions : protein= NP_649501;, nucleotide= NM_141244;
FlyMine data for FBgn0037282.
BDGP gene expression has embryonic in situ data for CG14657: 30 pix of staining in 7 body parts.
TRiP has 1 RNAi stocks for FBgn0037282 available for purchase.
VDRC has 2 RNAi stocks for FBgn0037282 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain93 74 of 4 1.10None
Head54 14 of 4 0.60Down
Eye39 24 of 4 0.47Down
Thoracicoabdominal ganglion111 14 of 4 1.30Up
Salivary gland83 34 of 4 0.98None
Crop62 24 of 4 0.70Down
Midgut82 14 of 4 1.00None
Tubule68 14 of 4 0.80Down
Hindgut64 14 of 4 0.80Down
Heart41 24 of 4 0.49Down
Fat body70 54 of 4 0.83None
Ovary193 74 of 4 2.30Up
Testis50 24 of 4 0.60Down
Male accessory glands532 94 of 4 6.30Up
Virgin spermatheca106 74 of 4 1.25None
Mated spermatheca104 84 of 4 1.22None
Adult carcass38 14 of 4 0.50Down
Larval CNS328 184 of 4 3.87Up
Larval Salivary gland98 44 of 4 1.16None
Larval midgut93 44 of 4 1.10None
Larval tubule119 74 of 4 1.40Up
Larval hindgut135 34 of 4 1.60Up
Larval fat body108 44 of 4 1.30Up
Larval trachea97 74 of 4 1.14None
Larval carcass86 14 of 4 1.01None
S2 cells (growing)185 54 of 4 2.18Up
Whole fly84 54 of 4

Looking for FBgn0037282. 1 entries matched from 18771, in 2 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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