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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037310 through 18771 annotations produced 1 hits



Tim17b1 (Tim17b1):

Annotation Number : CG1158
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037310
Gbrowse : chr3R:1125866-1126911 (+) // 100.0 //
Probeset : 1625751_at
Accessions : protein= NP_649526;, nucleotide= NM_141269;
Pathway : 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred
Interpro : 0008565 // protein transporter activity // inferred from electronic annotation /// 0015450 // P-P-bond-hydrolysis-driven
FlyMine data for FBgn0037310.
BDGP gene expression has embryonic in situ data for Tim17b1: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0037310 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.00Down
Head2 ± 00 of 4 0.10Down
Eye1 ± 00 of 4 0.03Down
Thoracicoabdominal ganglion1 ± 00 of 4 0.00Down
Salivary gland22 ± 41 of 4 0.42Down
Crop4 ± 00 of 4 0.10Down
Midgut1 ± 00 of 4 0.00Down
Tubule2 ± 00 of 4 0.10Down
Hindgut1 ± 00 of 4 0.00Down
Heart1 ± 00 of 4 0.03Down
Fat body3 ± 30 of 4 0.06Down
Ovary3 ± 00 of 4 0.10Down
Testis793 ± 244 of 415.30Up
Male accessory glands4 ± 10 of 4 0.10Down
Virgin spermatheca1 ± 00 of 4 0.03Down
Mated spermatheca1 ± 00 of 4 0.03Down
Adult carcass3 ± 20 of 4 0.10Down
Larval CNS1 ± 10 of 4 0.03Down
Larval Salivary gland4 ± 00 of 4 0.08Down
Larval midgut2 ± 00 of 4 0.05Down
Larval tubule3 ± 00 of 4 0.10Down
Larval hindgut1 ± 00 of 4 0.02Down
Larval fat body123 ± 583 of 4 2.40None
Larval trachea8 ± 51 of 4 0.16Down
Larval carcass3 ± 10 of 4 0.08Down
S2 cells (growing)0 ± 00 of 4 0.01Down
Whole fly52 ± 74 of 4

Looking for FBgn0037310. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime