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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037340 through 18771 annotations produced 1 hits



(CG14671):

Annotation Number : CG14671
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037340
Gbrowse : chr3R:1389914-1390447 (-) // 100.0 //
Probeset : 1637379_at
Accessions : protein= NP_649550;, nucleotide= NM_141293;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0037340.
BioGrid reports that CG14671 interacts with CG32514 CG6202 CG7911 CG8882 .
VDRC has 2 RNAi stocks for FBgn0037340 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain153 ± 44 of 4 1.10None
Head157 ± 44 of 4 1.10None
Eye131 ± 34 of 4 0.91None
Thoracicoabdominal ganglion217 ± 154 of 4 1.50Up
Salivary gland183 ± 124 of 4 1.27Up
Crop219 ± 124 of 4 1.50Up
Midgut314 ± 144 of 4 2.20Up
Tubule242 ± 34 of 4 1.70Up
Hindgut352 ± 204 of 4 2.40Up
Heart175 ± 114 of 4 1.21None
Fat body171 ± 54 of 4 1.18Up
Ovary230 ± 74 of 4 1.60Up
Testis35 ± 34 of 4 0.20Down
Male accessory glands276 ± 254 of 4 1.90Up
Virgin spermatheca177 ± 94 of 4 1.22Up
Mated spermatheca169 ± 74 of 4 1.17None
Adult carcass172 ± 224 of 4 1.20None
Larval CNS246 ± 124 of 4 1.70Up
Larval Salivary gland241 ± 124 of 4 1.67Up
Larval midgut180 ± 114 of 4 1.25None
Larval tubule296 ± 184 of 4 2.00Up
Larval hindgut279 ± 94 of 4 1.93Up
Larval fat body183 ± 154 of 4 1.30None
Larval trachea185 ± 224 of 4 1.28Up
Larval carcass182 ± 104 of 4 1.26Up
S2 cells (growing)177 ± 94 of 4 1.22Up
Whole fly144 ± 84 of 4

Looking for FBgn0037340. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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