Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037359 through 18771 annotations produced 1 hits



Mediator complex subunit 27 (MED27):

Annotation Number : CG1245
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037359
Gbrowse : chr3R:1480866-1482060 (+) // 100.0 //
Probeset : 1627003_at
Accessions : protein= NP_649569;, nucleotide= NM_141312;
Pathway : 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic
Interpro : 0003712 // transcription cofactor activity // inferred from sequence or structural similarity /// 0005515 // protein bin
FlyMine data for FBgn0037359.
BDGP gene expression has embryonic in situ data for Trap37: 10 pix of staining in 10 body parts.
TRiP has 1 RNAi stocks for FBgn0037359 available for purchase.
VDRC has 2 RNAi stocks for FBgn0037359 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain39 24 of 4 0.60Down
Head31 24 of 4 0.40Down
Eye29 24 of 4 0.43Down
Thoracicoabdominal ganglion36 34 of 4 0.50Down
Salivary gland32 44 of 4 0.47Down
Crop40 24 of 4 0.60Down
Midgut31 24 of 4 0.50Down
Tubule24 14 of 4 0.40Down
Hindgut26 14 of 4 0.40Down
Heart38 24 of 4 0.56Down
Fat body30 54 of 4 0.45Down
Ovary116 44 of 4 1.70Up
Testis210 14 of 4 3.00Up
Male accessory glands43 54 of 4 0.60Down
Virgin spermatheca25 14 of 4 0.37Down
Mated spermatheca33 24 of 4 0.49Down
Adult carcass30 23 of 4 0.40Down
Larval CNS132 44 of 4 1.92Up
Larval Salivary gland62 44 of 4 0.90None
Larval midgut28 14 of 4 0.41Down
Larval tubule35 14 of 4 0.50Down
Larval hindgut39 34 of 4 0.56Down
Larval fat body58 174 of 4 0.80None
Larval trachea77 94 of 4 1.12None
Larval carcass56 14 of 4 0.82None
S2 cells (growing)64 34 of 4 0.93None
Whole fly69 54 of 4

Looking for FBgn0037359. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime