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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037360 through 18771 annotations produced 1 hits



(CG2182):

Annotation Number : CG2182
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037360
Gbrowse : chr3R:1481951-1485631 (-) // 100.0 //
Probeset : 1639375_a_at
Accessions : protein= NP_649570; /// NP_730981;, nucleotide= NM_141313; /// NM_169090;
FlyMine data for FBgn0037360.
BioGrid reports that CG2182 interacts with CG7264 .
VDRC has 2 RNAi stocks for FBgn0037360 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain268 ± 64 of 4 0.80Down
Head156 ± 44 of 4 0.50Down
Eye217 ± 34 of 4 0.66Down
Thoracicoabdominal ganglion234 ± 34 of 4 0.70Down
Salivary gland378 ± 234 of 4 1.14None
Crop273 ± 44 of 4 0.80Down
Midgut178 ± 44 of 4 0.50Down
Tubule401 ± 194 of 4 1.20Up
Hindgut284 ± 24 of 4 0.90Down
Heart179 ± 74 of 4 0.54Down
Fat body82 ± 114 of 4 0.25Down
Ovary684 ± 54 of 4 2.10Up
Testis105 ± 24 of 4 0.30Down
Male accessory glands272 ± 104 of 4 0.80Down
Virgin spermatheca141 ± 34 of 4 0.43Down
Mated spermatheca152 ± 84 of 4 0.46Down
Adult carcass127 ± 44 of 4 0.40Down
Larval CNS234 ± 224 of 4 0.71Down
Larval Salivary gland283 ± 124 of 4 0.85Down
Larval midgut134 ± 44 of 4 0.41Down
Larval tubule361 ± 74 of 4 1.10Up
Larval hindgut262 ± 54 of 4 0.79Down
Larval fat body231 ± 104 of 4 0.70Down
Larval trachea314 ± 114 of 4 0.95None
Larval carcass209 ± 64 of 4 0.63Down
S2 cells (growing)342 ± 124 of 4 1.03None
Whole fly331 ± 84 of 4

Looking for FBgn0037360. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime