Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037368 through 18771 annotations produced 1 hits



(CG1239):

Annotation Number : CG1239
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037368
Gbrowse : chr3R:1559262-1560424 (+) // 100.0 //
Probeset : 1639370_at
Accessions : protein= NP_649577;, nucleotide= NM_141320;
Interpro : 0004652 // polynucleotide adenylyltransferase activity // inferred from sequence or structural similarity /// 0008168 //
FlyMine data for FBgn0037368.
BDGP gene expression has embryonic in situ data for CG1239: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0037368 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain59 ± 14 of 4 0.40Down
Head35 ± 14 of 4 0.30Down
Eye35 ± 14 of 4 0.27Down
Thoracicoabdominal ganglion58 ± 14 of 4 0.40Down
Salivary gland34 ± 32 of 4 0.26Down
Crop44 ± 34 of 4 0.30Down
Midgut36 ± 14 of 4 0.30Down
Tubule21 ± 22 of 4 0.20Down
Hindgut30 ± 14 of 4 0.20Down
Heart21 ± 24 of 4 0.16Down
Fat body30 ± 74 of 4 0.23Down
Ovary318 ± 114 of 4 2.40Up
Testis27 ± 14 of 4 0.20Down
Male accessory glands31 ± 24 of 4 0.20Down
Virgin spermatheca35 ± 04 of 4 0.26Down
Mated spermatheca36 ± 44 of 4 0.27Down
Adult carcass36 ± 63 of 4 0.30Down
Larval CNS70 ± 24 of 4 0.53Down
Larval Salivary gland32 ± 44 of 4 0.24Down
Larval midgut28 ± 22 of 4 0.21Down
Larval tubule34 ± 24 of 4 0.30Down
Larval hindgut31 ± 14 of 4 0.24Down
Larval fat body39 ± 44 of 4 0.30Down
Larval trachea46 ± 44 of 4 0.35Down
Larval carcass38 ± 24 of 4 0.29Down
S2 cells (growing)47 ± 14 of 4 0.36Down
Whole fly133 ± 24 of 4

Looking for FBgn0037368. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime