FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0037374 through 18771 annotations produced 2 hits

jagunal (jagn):

Annotation Number : CG10978
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037374
Gbrowse : chr3R:1605030-1607030 (+) // 100.0 //
Probeset : 1640445_at
Accessions : protein= NP_649585; /// NP_731002;, nucleotide= NM_141328; /// NM_169103;
Pathway : nurse cell to oocyte // non-traceable author statement /// 0008407 // bristle morphogenesis // inferred from mutant phe
Interpro : 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane //
FlyMine data for FBgn0037374.
BDGP gene expression has embryonic in situ data for CG10978: 12 pix of staining in 7 body parts.
BioGrid reports that CG10978 interacts with CG16853 .
VDRC has 1 RNAi stocks for FBgn0037374 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	394 ± 12	4 of 4	1.30	Up
Head	273 ± 11	4 of 4	0.90	None
Eye	185 ± 9	4 of 4	0.63	Down
Thoracicoabdominal ganglion	412 ± 5	4 of 4	1.40	Up
Salivary gland	598 ± 39	4 of 4	2.04	Up
Crop	607 ± 10	4 of 4	2.10	Up
Midgut	465 ± 6	4 of 4	1.60	Up
Tubule	398 ± 7	4 of 4	1.40	Up
Hindgut	283 ± 5	4 of 4	1.00	None
Heart	550 ± 21	4 of 4	1.88	Up
Fat body	679 ± 38	4 of 4	2.32	Up
Ovary	379 ± 9	4 of 4	1.30	Up
Testis	91 ± 7	4 of 4	0.30	Down
Male accessory glands	329 ± 15	4 of 4	1.10	None
Virgin spermatheca	612 ± 14	4 of 4	2.09	Up
Mated spermatheca	797 ± 30	4 of 4	2.72	Up
Adult carcass	429 ± 22	4 of 4	1.50	Up
Larval CNS	383 ± 12	4 of 4	1.31	Up
Larval Salivary gland	936 ± 30	4 of 4	3.20	Up
Larval midgut	534 ± 22	4 of 4	1.82	Up
Larval tubule	381 ± 5	4 of 4	1.30	Up
Larval hindgut	379 ± 5	4 of 4	1.29	Up
Larval fat body	645 ± 57	4 of 4	2.20	Up
Larval trachea	586 ± 28	4 of 4	2.00	Up
Larval carcass	776 ± 55	4 of 4	2.65	Up
S2 cells (growing)	577 ± 2	4 of 4	1.97	Up
Whole fly	292 ± 25	4 of 4

jagunal (jagn):

Annotation Number : CG10978
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037374
Gbrowse : chr3R:1605030-1606488 (+) // 100.0 //
Probeset : 1630668_a_at
Accessions : protein= NP_649585; /// NP_731002;, nucleotide= NM_141328; /// NM_169103;
Pathway : nurse cell to oocyte // non-traceable author statement /// 0008407 // bristle morphogenesis // inferred from mutant phe
Interpro : 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane //
FlyMine data for FBgn0037374.
BDGP gene expression has embryonic in situ data for CG10978: 12 pix of staining in 7 body parts.
BioGrid reports that CG10978 interacts with CG16853 .
VDRC has 1 RNAi stocks for FBgn0037374 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	188 ± 4	4 of 4	1.30	Up
Head	105 ± 9	4 of 4	0.70	Down
Eye	67 ± 2	4 of 4	0.48	Down
Thoracicoabdominal ganglion	129 ± 10	4 of 4	0.90	None
Salivary gland	172 ± 5	4 of 4	1.22	Up
Crop	202 ± 11	4 of 4	1.40	Up
Midgut	200 ± 7	4 of 4	1.40	Up
Tubule	84 ± 3	4 of 4	0.60	Down
Hindgut	149 ± 2	4 of 4	1.10	None
Heart	254 ± 7	4 of 4	1.80	Up
Fat body	223 ± 40	4 of 4	1.58	Up
Ovary	191 ± 2	4 of 4	1.40	Up
Testis	100 ± 5	4 of 4	0.70	Down
Male accessory glands	106 ± 7	4 of 4	0.80	Down
Virgin spermatheca	36 ± 0	4 of 4	0.26	Down
Mated spermatheca	42 ± 2	4 of 4	0.30	Down
Adult carcass	204 ± 10	4 of 4	1.40	Up
Larval CNS	131 ± 10	4 of 4	0.93	None
Larval Salivary gland	290 ± 39	4 of 4	2.06	Up
Larval midgut	115 ± 5	4 of 4	0.82	Down
Larval tubule	134 ± 4	4 of 4	1.00	None
Larval hindgut	111 ± 6	4 of 4	0.79	Down
Larval fat body	156 ± 13	4 of 4	1.10	None
Larval trachea	229 ± 20	4 of 4	1.63	Up
Larval carcass	237 ± 29	4 of 4	1.69	Up
S2 cells (growing)	342 ± 4	4 of 4	2.43	Up
Whole fly	141 ± 5	4 of 4

Looking for FBgn0037374. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720