Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037395 through 18771 annotations produced 1 hits



(CG10280):

Annotation Number : CG10280
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037395
Gbrowse : chr3R:1836294-1837654 (-) // 100.0 //
Probeset : 1637757_at
Accessions : protein= NP_649607;, nucleotide= NM_141350;
Interpro : 0004222 // metalloendopeptidase activity // inferred from sequence or structural similarity /// 0004222 // metalloendope
FlyMine data for FBgn0037395.
BioGrid reports that CG10280 interacts with CG9511 .
VDRC has 2 RNAi stocks for FBgn0037395 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 1.10None
Head1 ± 00 of 4 0.90None
Eye3 ± 00 of 4 2.30None
Thoracicoabdominal ganglion2 ± 00 of 4 1.60None
Salivary gland5 ± 00 of 4 3.86Up
Crop1 ± 00 of 4 1.10None
Midgut1 ± 00 of 4 1.20None
Tubule3 ± 00 of 4 2.80Up
Hindgut1 ± 00 of 4 1.20None
Heart3 ± 10 of 4 2.71None
Fat body1 ± 10 of 4 0.95None
Ovary0 ± 00 of 4 0.60None
Testis2 ± 00 of 4 2.10None
Male accessory glands2 ± 10 of 4 1.90None
Virgin spermatheca2 ± 00 of 4 1.91None
Mated spermatheca1 ± 00 of 4 0.89None
Adult carcass2 ± 00 of 4 2.00None
Larval CNS0 ± 00 of 4 0.70None
Larval Salivary gland2 ± 00 of 4 1.63None
Larval midgut2 ± 00 of 4 1.66None
Larval tubule1 ± 00 of 4 1.30None
Larval hindgut7 ± 10 of 4 5.63Up
Larval fat body1 ± 00 of 4 0.90None
Larval trachea19 ± 84 of 413.71Up
Larval carcass2 ± 10 of 4 1.66None
S2 cells (growing)1 ± 00 of 4 0.80None
Whole fly1 ± 00 of 4

Looking for FBgn0037395. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime