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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037412 through 18771 annotations produced 1 hits



Osiris (Osi4):

Annotation Number : CG10303
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037412
Gbrowse : chr3R:2044039-2047503 (-) // 100.0 //
Probeset : 1623290_at
Accessions : protein= NP_649623;, nucleotide= NM_141366;
FlyMine data for FBgn0037412.
BDGP gene expression has embryonic in situ data for CG10303: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0037412 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain7 ± 01 of 4 2.70None
Head5 ± 00 of 4 1.70None
Eye4 ± 10 of 4 1.67None
Thoracicoabdominal ganglion18 ± 14 of 4 6.40Up
Salivary gland17 ± 10 of 4 6.03Up
Crop6 ± 10 of 4 2.10None
Midgut4 ± 10 of 4 1.60None
Tubule5 ± 10 of 4 1.70Up
Hindgut5 ± 10 of 4 1.80None
Heart1 ± 10 of 4 0.51None
Fat body6 ± 30 of 4 2.11None
Ovary0 ± 00 of 4 0.30None
Testis3 ± 10 of 4 1.30None
Male accessory glands5 ± 20 of 4 1.80None
Virgin spermatheca13 ± 01 of 4 4.65Up
Mated spermatheca13 ± 20 of 4 4.72Up
Adult carcass7 ± 20 of 4 2.40None
Larval CNS7 ± 21 of 4 2.43None
Larval Salivary gland4 ± 10 of 4 1.53None
Larval midgut5 ± 00 of 4 1.72None
Larval tubule3 ± 10 of 4 1.10None
Larval hindgut6 ± 10 of 4 2.08None
Larval fat body4 ± 10 of 4 1.40None
Larval trachea4 ± 10 of 4 1.42None
Larval carcass4 ± 10 of 4 1.66None
S2 cells (growing)1 ± 00 of 4 0.56None
Whole fly2 ± 10 of 4

Looking for FBgn0037412. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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