Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
About & FAQ
Top 50
Original data
Interesting meta-analysis

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0037414 through 18771 annotations produced 1 hits

Osiris (Osi7):

Annotation Number : CG1153
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037414
Gbrowse : chr3R:2074713-2075795 (+) // 100.0 //
Probeset : 1636325_at
Accessions : protein= NP_649626;, nucleotide= NM_141369;
FlyMine data for FBgn0037414.
BDGP gene expression has embryonic in situ data for CG1153: 12 pix of staining in 4 body parts.
VDRC has 3 RNAi stocks for FBgn0037414 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.10None
Head3 00 of 4 0.30None
Eye1 00 of 4 0.10None
Thoracicoabdominal ganglion1 00 of 4 0.10None
Salivary gland4 10 of 4 0.38None
Crop2 00 of 4 0.20None
Midgut2 00 of 4 0.20None
Tubule2 00 of 4 0.20Down
Hindgut1 00 of 4 0.20None
Heart1 00 of 4 0.15None
Fat body4 10 of 4 0.36None
Ovary3 00 of 4 0.30None
Testis2 00 of 4 0.20None
Male accessory glands1 00 of 4 0.10None
Virgin spermatheca2 00 of 4 0.17None
Mated spermatheca1 00 of 4 0.14None
Adult carcass2 00 of 4 0.30None
Larval CNS1 00 of 4 0.11None
Larval Salivary gland3 10 of 4 0.29None
Larval midgut4 20 of 4 0.41None
Larval tubule2 00 of 4 0.20None
Larval hindgut2 00 of 4 0.20None
Larval fat body8 40 of 4 0.70None
Larval trachea5 30 of 4 0.52None
Larval carcass9 10 of 4 0.82None
S2 cells (growing)4 10 of 4 0.43None
Whole fly11 51 of 4

Looking for FBgn0037414. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime