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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037448 through 18771 annotations produced 1 hits



/// /// (CG15186 /// DmauCG15186 /// DsimCG15186):

Annotation Number : CG15186
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037448
Gbrowse : chr3R:2308517-2320755 (+) // 100.0 //
Probeset : 1633788_s_at
Accessions : protein= NP_649659; /// NP_731089; /// NP_996158;, nucleotide= NM_141402; /// NM_169145; /// NM_206436;
FlyMine data for FBgn0037448.
VDRC has 1 RNAi stocks for FBgn0037448 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain10 ± 14 of 4 0.70None
Head40 ± 34 of 4 2.70Up
Eye88 ± 114 of 4 5.82Up
Thoracicoabdominal ganglion5 ± 12 of 4 0.40Down
Salivary gland12 ± 22 of 4 0.80None
Crop593 ± 214 of 438.90Up
Midgut49 ± 14 of 4 3.20Up
Tubule11 ± 03 of 4 0.70Down
Hindgut108 ± 14 of 4 7.10Up
Heart102 ± 174 of 4 6.68Up
Fat body7 ± 13 of 4 0.46Down
Ovary5 ± 14 of 4 0.40Down
Testis17 ± 04 of 4 1.20None
Male accessory glands51 ± 44 of 4 3.40Up
Virgin spermatheca24 ± 14 of 4 1.58Up
Mated spermatheca22 ± 34 of 4 1.49None
Adult carcass20 ± 24 of 4 1.30None
Larval CNS5 ± 13 of 4 0.35Down
Larval Salivary gland8 ± 13 of 4 0.56Down
Larval midgut48 ± 84 of 4 3.16Up
Larval tubule9 ± 13 of 4 0.60Down
Larval hindgut50 ± 14 of 4 3.30Up
Larval fat body3 ± 11 of 4 0.20Down
Larval trachea6 ± 41 of 4 0.45Down
Larval carcass91 ± 284 of 4 5.99None
S2 cells (growing)3 ± 02 of 4 0.23Down
Whole fly15 ± 14 of 4

Looking for FBgn0037448. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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