Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037449 through 18771 annotations produced 1 hits



(CG15185):

Annotation Number : CG15185
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037449
Gbrowse : chr3R:2353250-2354279 (+) // 100.0 //
Probeset : 1624048_at
Accessions : protein= NP_649660;, nucleotide= NM_141403;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0037449.
BioGrid reports that CG15185 interacts with CG2621 CG7786 CG9113 .
VDRC has 3 RNAi stocks for FBgn0037449 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 1.20None
Head0 ± 00 of 4 0.60None
Eye0 ± 00 of 4 0.46None
Thoracicoabdominal ganglion2 ± 10 of 4 1.60None
Salivary gland7 ± 10 of 4 5.85Up
Crop4 ± 20 of 4 3.10None
Midgut4 ± 10 of 4 3.00None
Tubule2 ± 00 of 4 1.70None
Hindgut2 ± 00 of 4 1.60None
Heart0 ± 00 of 4 0.63None
Fat body1 ± 00 of 4 1.13None
Ovary1 ± 00 of 4 1.30None
Testis39 ± 14 of 430.40Up
Male accessory glands2 ± 00 of 4 2.30None
Virgin spermatheca1 ± 00 of 4 1.00None
Mated spermatheca1 ± 00 of 4 1.04None
Adult carcass2 ± 00 of 4 1.80None
Larval CNS1 ± 00 of 4 0.77None
Larval Salivary gland1 ± 00 of 4 1.35None
Larval midgut2 ± 00 of 4 1.92None
Larval tubule1 ± 00 of 4 1.50None
Larval hindgut1 ± 00 of 4 1.27None
Larval fat body8 ± 41 of 4 6.50None
Larval trachea1 ± 00 of 4 0.92None
Larval carcass1 ± 00 of 4 0.92None
S2 cells (growing)1 ± 00 of 4 0.92None
Whole fly1 ± 00 of 4

Looking for FBgn0037449. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime