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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037463 through 18771 annotations produced 1 hits



don juan like (djl):

Annotation Number : CG1984
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037463
Gbrowse : chr3R:2886612-2887638 (+) // 100.0 //
Probeset : 1632368_at
Accessions : protein= NP_649686;, nucleotide= NM_141429;
Pathway : 0016007 // mitochondrial derivative // non-traceable author statement /// 0019861 // flagellum // non-traceable author s
FlyMine data for FBgn0037463.
BioGrid reports that CG1984 interacts with CG9871 .
VDRC has 2 RNAi stocks for FBgn0037463 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 01 of 4 0.00Down
Head5 03 of 4 0.00Down
Eye3 11 of 4 0.02Down
Thoracicoabdominal ganglion4 12 of 4 0.00Down
Salivary gland22 42 of 4 0.14Down
Crop8 23 of 4 0.10Down
Midgut3 10 of 4 0.00Down
Tubule8 12 of 4 0.10Down
Hindgut6 02 of 4 0.00Down
Heart3 11 of 4 0.02Down
Fat body13 24 of 4 0.09Down
Ovary1 00 of 4 0.00Down
Testis1268 1034 of 4 8.20Up
Male accessory glands4 10 of 4 0.00Down
Virgin spermatheca12 14 of 4 0.08Down
Mated spermatheca13 24 of 4 0.08Down
Adult carcass7 00 of 4 0.00Down
Larval CNS5 23 of 4 0.03Down
Larval Salivary gland6 12 of 4 0.04Down
Larval midgut5 11 of 4 0.03Down
Larval tubule4 00 of 4 0.00Down
Larval hindgut4 03 of 4 0.03Down
Larval fat body115 574 of 4 0.70None
Larval trachea6 61 of 4 0.04Down
Larval carcass3 00 of 4 0.02Down
S2 cells (growing)3 01 of 4 0.02Down
Whole fly155 134 of 4

Looking for FBgn0037463. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime