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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037465 through 18771 annotations produced 1 hits



(CG1105):

Annotation Number : CG1105
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037465
Gbrowse : chr3R:2889907-2892854 (-) // 100.0 //
Probeset : 1624795_at
Accessions : protein= NP_649688;, nucleotide= NM_141431;
FlyMine data for FBgn0037465.
TRiP has 2 RNAi stocks for FBgn0037465 available for purchase.
VDRC has 3 RNAi stocks for FBgn0037465 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain108 ± 44 of 4 1.20Up
Head98 ± 44 of 4 1.10None
Eye56 ± 34 of 4 0.64Down
Thoracicoabdominal ganglion147 ± 34 of 4 1.70Up
Salivary gland183 ± 174 of 4 2.07Up
Crop342 ± 34 of 4 3.90Up
Midgut53 ± 14 of 4 0.60Down
Tubule97 ± 54 of 4 1.10None
Hindgut232 ± 84 of 4 2.60Up
Heart121 ± 64 of 4 1.38Up
Fat body125 ± 164 of 4 1.42Up
Ovary117 ± 34 of 4 1.30Up
Testis82 ± 34 of 4 0.90None
Male accessory glands114 ± 44 of 4 1.30Up
Virgin spermatheca73 ± 64 of 4 0.83None
Mated spermatheca106 ± 54 of 4 1.20None
Adult carcass96 ± 64 of 4 1.10None
Larval CNS186 ± 174 of 4 2.10Up
Larval Salivary gland616 ± 354 of 4 6.96Up
Larval midgut86 ± 84 of 4 0.97None
Larval tubule179 ± 54 of 4 2.00Up
Larval hindgut312 ± 74 of 4 3.54Up
Larval fat body353 ± 384 of 4 4.00Up
Larval trachea310 ± 244 of 4 3.51Up
Larval carcass375 ± 144 of 4 4.24Up
S2 cells (growing)156 ± 34 of 4 1.77Up
Whole fly88 ± 64 of 4

Looking for FBgn0037465. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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