FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0037477 through 18771 annotations produced 1 hits

(CG14610):

Annotation Number : CG14610
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037477
Gbrowse : chr3R:2969480-2969885 (-) // 100.0 //
Probeset : 1636683_at
Accessions : protein= NP_649698;, nucleotide= NM_141441;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0037477.
VDRC has 3 RNAi stocks for FBgn0037477 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 1	0 of 4	1.20	None
Head	3 ± 1	0 of 4	1.80	None
Eye	1 ± 0	0 of 4	0.56	None
Thoracicoabdominal ganglion	2 ± 1	0 of 4	1.20	None
Salivary gland	6 ± 2	0 of 4	3.45	None
Crop	4 ± 1	0 of 4	2.50	None
Midgut	7 ± 2	0 of 4	3.90	None
Tubule	5 ± 1	0 of 4	2.50	Up
Hindgut	3 ± 1	0 of 4	1.50	None
Heart	5 ± 1	0 of 4	2.55	None
Fat body	4 ± 3	0 of 4	2.19	None
Ovary	1 ± 0	0 of 4	0.80	None
Testis	18 ± 2	3 of 4	9.30	Up
Male accessory glands	13 ± 1	1 of 4	6.90	Up
Virgin spermatheca	3 ± 1	0 of 4	1.69	None
Mated spermatheca	7 ± 2	0 of 4	3.65	None
Adult carcass	7 ± 3	0 of 4	3.90	None
Larval CNS	4 ± 3	0 of 4	2.20	None
Larval Salivary gland	1 ± 0	0 of 4	0.91	None
Larval midgut	9 ± 1	0 of 4	4.60	Up
Larval tubule	6 ± 2	0 of 4	3.00	None
Larval hindgut	1 ± 0	0 of 4	0.51	None
Larval fat body	9 ± 4	0 of 4	4.50	None
Larval trachea	1 ± 0	0 of 4	0.62	None
Larval carcass	4 ± 1	0 of 4	2.42	None
S2 cells (growing)	1 ± 0	0 of 4	0.70	None
Whole fly	2 ± 1	0 of 4

Looking for FBgn0037477. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720