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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037491 through 18771 annotations produced 1 hits



(CG1227):

Annotation Number : CG1227
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037491
Gbrowse : chr3R:3073870-3075457 (-) // 100.0 //
Probeset : 1636599_at
Accessions : protein= NP_649712;, nucleotide= NM_141455;
Interpro : 0004672 // protein kinase activity // non-traceable author statement /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0037491.
BDGP gene expression has embryonic in situ data for CG1227: 6 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0037491 available for purchase.
VDRC has 3 RNAi stocks for FBgn0037491 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain65 ± 24 of 4 0.60Down
Head82 ± 34 of 4 0.70Down
Eye68 ± 44 of 4 0.58Down
Thoracicoabdominal ganglion63 ± 24 of 4 0.50Down
Salivary gland117 ± 114 of 4 0.99None
Crop74 ± 34 of 4 0.60Down
Midgut86 ± 44 of 4 0.70Down
Tubule366 ± 74 of 4 3.10Up
Hindgut63 ± 34 of 4 0.50Down
Heart80 ± 44 of 4 0.68Down
Fat body104 ± 134 of 4 0.88None
Ovary276 ± 104 of 4 2.30Up
Testis20 ± 14 of 4 0.20Down
Male accessory glands81 ± 64 of 4 0.70Down
Virgin spermatheca115 ± 44 of 4 0.98None
Mated spermatheca141 ± 34 of 4 1.19Up
Adult carcass66 ± 44 of 4 0.60Down
Larval CNS99 ± 44 of 4 0.84None
Larval Salivary gland148 ± 44 of 4 1.25Up
Larval midgut43 ± 44 of 4 0.37Down
Larval tubule173 ± 64 of 4 1.50Up
Larval hindgut68 ± 54 of 4 0.57Down
Larval fat body76 ± 54 of 4 0.60Down
Larval trachea94 ± 84 of 4 0.79Down
Larval carcass53 ± 44 of 4 0.45Down
S2 cells (growing)95 ± 24 of 4 0.81Down
Whole fly118 ± 74 of 4

Looking for FBgn0037491. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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