Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037500 through 18771 annotations produced 2 hits



(CG17944):

Annotation Number : CG17944
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037500
Gbrowse : chr3R:3187101-3187845 (-) // 100.0 //
Probeset : 1623195_at
Accessions : protein= NP_649718; /// NP_731158;, nucleotide= NM_141461; /// NM_169184;
FlyMine data for FBgn0037500.
VDRC has 1 RNAi stocks for FBgn0037500 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 00 of 4 0.00Down
Head0 00 of 4 0.00Down
Eye2 10 of 4 0.04Down
Thoracicoabdominal ganglion2 10 of 4 0.00Down
Salivary gland3 20 of 4 0.05Down
Crop4 10 of 4 0.10Down
Midgut2 10 of 4 0.00Down
Tubule3 00 of 4 0.10Down
Hindgut0 00 of 4 0.00Down
Heart2 10 of 4 0.03Down
Fat body2 40 of 4 0.04Down
Ovary0 00 of 4 0.00Down
Testis873 344 of 412.00Up
Male accessory glands2 10 of 4 0.00Down
Virgin spermatheca2 10 of 4 0.03Down
Mated spermatheca1 10 of 4 0.02Down
Adult carcass3 10 of 4 0.10Down
Larval CNS1 10 of 4 0.01Down
Larval Salivary gland0 00 of 4 0.01Down
Larval midgut3 10 of 4 0.05Down
Larval tubule2 00 of 4 0.00Down
Larval hindgut0 00 of 4 0.01Down
Larval fat body60 313 of 4 0.80None
Larval trachea4 41 of 4 0.06Down
Larval carcass2 10 of 4 0.04Down
S2 cells (growing)0 00 of 4 0.01Down
Whole fly72 24 of 4



(CG17944):

Annotation Number : CG17944
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037500
Gbrowse : chr3R:3187101-3187845 (-) // 100.0 //
Probeset : 1639070_a_at
Accessions : protein= NP_649718; /// NP_731158;, nucleotide= NM_141461; /// NM_169184;
FlyMine data for FBgn0037500.
VDRC has 1 RNAi stocks for FBgn0037500 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.00Down
Head1 00 of 4 0.00Down
Eye3 01 of 4 0.05Down
Thoracicoabdominal ganglion1 00 of 4 0.00Down
Salivary gland3 20 of 4 0.05Down
Crop1 00 of 4 0.00Down
Midgut3 00 of 4 0.10Down
Tubule3 00 of 4 0.00Down
Hindgut0 00 of 4 0.00Down
Heart1 00 of 4 0.02Down
Fat body0 00 of 4 0.01Down
Ovary0 00 of 4 0.00Down
Testis725 274 of 411.50Up
Male accessory glands4 20 of 4 0.10Down
Virgin spermatheca1 00 of 4 0.03Down
Mated spermatheca2 10 of 4 0.05Down
Adult carcass6 10 of 4 0.10Down
Larval CNS2 10 of 4 0.03Down
Larval Salivary gland1 00 of 4 0.03Down
Larval midgut4 10 of 4 0.07Down
Larval tubule3 00 of 4 0.00Down
Larval hindgut1 00 of 4 0.03Down
Larval fat body42 212 of 4 0.70None
Larval trachea4 41 of 4 0.06Down
Larval carcass1 00 of 4 0.02Down
S2 cells (growing)0 00 of 4 0.01Down
Whole fly63 14 of 4

Looking for FBgn0037500. 2 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime