Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037518 through 18771 annotations produced 1 hits



(CG2641):

Annotation Number : CG2641
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037518
Gbrowse : chr3R:3619930-3622321 (+) // 100.0 //
Probeset : 1625644_at
Accessions : protein= NP_649737;, nucleotide= NM_141480;
FlyMine data for FBgn0037518.
BDGP gene expression has embryonic in situ data for CG2641: 9 pix of staining in 3 body parts.
BioGrid reports that CG2641 interacts with CG3021 CG33193 .
TRiP has 1 RNAi stocks for FBgn0037518 available for purchase.
VDRC has 1 RNAi stocks for FBgn0037518 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain22 ± 14 of 4 0.60Down
Head55 ± 54 of 4 1.50Up
Eye22 ± 14 of 4 0.62Down
Thoracicoabdominal ganglion55 ± 34 of 4 1.50Up
Salivary gland91 ± 44 of 4 2.54Up
Crop201 ± 64 of 4 5.60Up
Midgut51 ± 14 of 4 1.40Up
Tubule60 ± 44 of 4 1.70Up
Hindgut83 ± 54 of 4 2.30Up
Heart101 ± 64 of 4 2.82Up
Fat body110 ± 164 of 4 3.05Up
Ovary51 ± 24 of 4 1.40Up
Testis11 ± 14 of 4 0.30Down
Male accessory glands21 ± 24 of 4 0.60Down
Virgin spermatheca52 ± 14 of 4 1.44Up
Mated spermatheca52 ± 74 of 4 1.44None
Adult carcass64 ± 54 of 4 1.80Up
Larval CNS42 ± 44 of 4 1.18None
Larval Salivary gland119 ± 94 of 4 3.30Up
Larval midgut50 ± 34 of 4 1.41Up
Larval tubule356 ± 204 of 4 9.90Up
Larval hindgut121 ± 84 of 4 3.36Up
Larval fat body831 ± 834 of 423.10Up
Larval trachea155 ± 154 of 4 4.31Up
Larval carcass106 ± 64 of 4 2.95Up
S2 cells (growing)108 ± 34 of 4 3.00Up
Whole fly36 ± 14 of 4

Looking for FBgn0037518. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime