FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0037525 through 18771 annotations produced 2 hits

(CG17816):

Annotation Number : Stencil:3R:3685174:3683910:GENSCAN
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037525
Gbrowse : chr3R:3683895-3685159 (-) // 100.0 //
Probeset : 1637250_at
Accessions : protein= NP_001097705; /// NP_001097706; /// NP_001163541; /// NP_731191; /// NP_996180;, nucleotide= NM_001104235; /// NM_001104236; /// NM_001170070; /// NM_169198; /// NM_206458;
Pathway : 0016020 // membrane // inferred from electronic annotation
FlyMine data for FBgn0037525.
VDRC has 1 RNAi stocks for FBgn0037525 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	36 ± 2	4 of 4	5.50	Up
Head	4 ± 2	0 of 4	0.70	None
Eye	6 ± 3	0 of 4	0.91	None
Thoracicoabdominal ganglion	34 ± 5	0 of 4	5.20	Up
Salivary gland	11 ± 5	0 of 4	1.70	None
Crop	9 ± 2	0 of 4	1.40	None
Midgut	4 ± 1	0 of 4	0.70	None
Tubule	3 ± 0	0 of 4	0.50	Down
Hindgut	4 ± 2	0 of 4	0.60	None
Heart	1 ± 0	0 of 4	0.15	None
Fat body	3 ± 4	0 of 4	0.48	None
Ovary	19 ± 1	0 of 4	2.90	Up
Testis	48 ± 3	0 of 4	7.20	Up
Male accessory glands	2 ± 0	0 of 4	0.40	None
Virgin spermatheca	2 ± 0	0 of 4	0.37	None
Mated spermatheca	2 ± 0	0 of 4	0.33	None
Adult carcass	3 ± 1	0 of 4	0.60	None
Larval CNS	12 ± 5	0 of 4	1.87	None
Larval Salivary gland	1 ± 0	0 of 4	0.22	None
Larval midgut	1 ± 0	0 of 4	0.26	None
Larval tubule	3 ± 1	0 of 4	0.50	None
Larval hindgut	1 ± 0	0 of 4	0.19	None
Larval fat body	8 ± 4	0 of 4	1.20	None
Larval trachea	2 ± 0	0 of 4	0.33	None
Larval carcass	2 ± 0	0 of 4	0.42	None
S2 cells (growing)	3 ± 0	0 of 4	0.44	None
Whole fly	6 ± 2	0 of 4

(CG17816):

Annotation Number : CG17816
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse : chr3R:3686683-3712454 (-) // 99.5 //
Probeset : 1638984_s_at
Accessions : protein= NP_001097705; /// NP_001097706; /// NP_001163541; /// NP_731191; /// NP_996180;, nucleotide= NM_001104235; /// NM_001104236; /// NM_001170070; /// NM_169198; /// NM_206458;
Pathway : 0016020 // membrane // inferred from electronic annotation

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	471 ± 19	4 of 4	33.10	Up
Head	22 ± 1	4 of 4	1.60	Up
Eye	73 ± 6	4 of 4	5.15	Up
Thoracicoabdominal ganglion	396 ± 22	4 of 4	27.80	Up
Salivary gland	19 ± 3	3 of 4	1.36	None
Crop	17 ± 1	4 of 4	1.20	None
Midgut	4 ± 0	2 of 4	0.30	Down
Tubule	7 ± 1	1 of 4	0.50	Down
Hindgut	7 ± 0	3 of 4	0.50	Down
Heart	9 ± 1	4 of 4	0.67	Down
Fat body	34 ± 17	4 of 4	2.42	None
Ovary	22 ± 1	4 of 4	1.50	Up
Testis	22 ± 3	4 of 4	1.60	None
Male accessory glands	13 ± 1	3 of 4	1.00	None
Virgin spermatheca	22 ± 2	4 of 4	1.56	Up
Mated spermatheca	27 ± 6	4 of 4	1.92	None
Adult carcass	14 ± 2	3 of 4	1.00	None
Larval CNS	167 ± 17	4 of 4	11.73	Up
Larval Salivary gland	13 ± 1	4 of 4	0.92	None
Larval midgut	5 ± 0	0 of 4	0.41	Down
Larval tubule	5 ± 1	1 of 4	0.40	Down
Larval hindgut	7 ± 1	3 of 4	0.53	Down
Larval fat body	14 ± 3	3 of 4	1.00	None
Larval trachea	15 ± 2	4 of 4	1.07	None
Larval carcass	8 ± 1	3 of 4	0.59	None
S2 cells (growing)	4 ± 1	2 of 4	0.29	Down
Whole fly	14 ± 1	4 of 4

Looking for FBgn0037525. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720