Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037546 through 18771 annotations produced 1 hits



chr3R:3885005-3912767 (+) // 100.0 // ():

Annotation Number : CG7918
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1639186_at
Accessions : protein= , nucleotide= NP_649764;
Pathway : 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor protein
Interpro : 0016021 // integral to membrane // inferred from sequence or structural similarity /// 0016021 // integral to membrane /
FlyMine data for full length.
Homophila reports that CG7918 is a close match (2e-14) to human gene DRD1B;DRD1L2;DRD5 (NP_000789), a gene associated with Dystonia, primary cervical (3);{Attention deficit-hyperactivity disorder, susceptibility to}, 143465 (3);{Blepharospasm, primary benign}, 606798 (3).


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain257 ± 64 of 435.20Up
Head53 ± 24 of 4 7.40Up
Eye7 ± 04 of 4 1.07None
Thoracicoabdominal ganglion93 ± 24 of 412.80Up
Salivary gland4 ± 10 of 4 0.57None
Crop4 ± 10 of 4 0.60None
Midgut9 ± 14 of 4 1.30None
Tubule3 ± 00 of 4 0.40Down
Hindgut5 ± 13 of 4 0.70None
Heart1 ± 00 of 4 0.20Down
Fat body6 ± 23 of 4 0.89None
Ovary2 ± 01 of 4 0.30Down
Testis2 ± 00 of 4 0.40Down
Male accessory glands6 ± 11 of 4 0.90None
Virgin spermatheca4 ± 01 of 4 0.59Down
Mated spermatheca5 ± 02 of 4 0.73None
Adult carcass3 ± 11 of 4 0.50None
Larval CNS79 ± 34 of 410.88Up
Larval Salivary gland11 ± 14 of 4 1.63None
Larval midgut7 ± 13 of 4 0.99None
Larval tubule5 ± 11 of 4 0.70None
Larval hindgut4 ± 11 of 4 0.61None
Larval fat body5 ± 12 of 4 0.70None
Larval trachea10 ± 54 of 4 1.44None
Larval carcass4 ± 11 of 4 0.59None
S2 cells (growing)25 ± 34 of 4 3.55Up
Whole fly7 ± 04 of 4

Looking for FBgn0037546. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime