Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: 16/4/2014: We have just migrated to a new server (the old one ran XP!).
Latest news: Please report unexpected behaviours to julian.dow @ glasgow. ac. uk
Latest news: Our alternative view (http://flyatlas.gla.ac.uk/flyatlas/index.html) is still available.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037555 through 18771 annotations produced 1 hits



Transcriptional adapter 2S (Ada2b):

Annotation Number : CG9638
Flybase ID : FBgn0037555
Gbrowse : chr3R:4062837-4066234 (-) // 100.0 //
Probeset : 1623806_at
Accessions : protein= NP_001027151; /// NP_649773;, nucleotide= NM_001031980; /// NM_141516;
Pathway : 0000124 // SAGA complex // inferred from physical interaction /// 0000124 // SAGA complex // non-traceable author statem
Interpro : 0003677 // DNA binding // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // non-t
FlyMine data for FBgn0037555.
BioGrid reports that CG9638 interacts with CG9712 CG9894 CG7704 CG6474 CG2859 CG33520 .
TRiP has 2 RNAi stocks for FBgn0037555 available for purchase.
VDRC has 1 RNAi stocks for FBgn0037555 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain76 34 of 4 0.50Down
Head45 24 of 4 0.30Down
Eye35 14 of 4 0.22Down
Thoracicoabdominal ganglion48 44 of 4 0.30Down
Salivary gland102 84 of 4 0.64Down
Crop57 34 of 4 0.40Down
Midgut69 34 of 4 0.40Down
Tubule83 54 of 4 0.50Down
Hindgut64 44 of 4 0.40Down
Heart43 24 of 4 0.28Down
Fat body60 44 of 4 0.38Down
Ovary363 74 of 4 2.30Up
Testis37 34 of 4 0.20Down
Male accessory glands66 44 of 4 0.40Down
Virgin spermatheca50 24 of 4 0.32Down
Mated spermatheca37 44 of 4 0.23Down
Adult carcass50 34 of 4 0.30Down
Larval CNS116 84 of 4 0.73Down
Larval Salivary gland113 54 of 4 0.71Down
Larval midgut62 44 of 4 0.40Down
Larval tubule118 54 of 4 0.70Down
Larval hindgut79 64 of 4 0.50Down
Larval fat body55 24 of 4 0.40Down
Larval trachea79 54 of 4 0.50Down
Larval carcass71 34 of 4 0.45Down
S2 cells (growing)78 14 of 4 0.49Down
Whole fly159 84 of 4

Looking for FBgn0037555. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime