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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037576 through 18771 annotations produced 1 hits



Odorant receptor 85a (Or85a):

Annotation Number : CG7454
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037576
Gbrowse : chr3R:4147468-4148776 (+) // 100.0 //
Probeset : 1626501_at
Accessions : protein= NP_524277;, nucleotide= NM_079553;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0037576.
VDRC has 3 RNAi stocks for FBgn0037576 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 2.10None
Head3 ± 20 of 4 5.40None
Eye0 ± 00 of 4 1.22None
Thoracicoabdominal ganglion1 ± 00 of 4 2.50None
Salivary gland3 ± 10 of 4 5.13None
Crop0 ± 00 of 4 1.00None
Midgut0 ± 00 of 4 0.70None
Tubule2 ± 00 of 4 3.90Up
Hindgut1 ± 00 of 4 2.00None
Heart1 ± 00 of 4 2.00None
Fat body0 ± 00 of 4 1.61None
Ovary1 ± 00 of 4 2.00None
Testis0 ± 00 of 4 0.90None
Male accessory glands0 ± 00 of 4 1.20None
Virgin spermatheca1 ± 00 of 4 2.35None
Mated spermatheca2 ± 10 of 4 4.48None
Adult carcass0 ± 00 of 4 0.80None
Larval CNS1 ± 10 of 4 2.00None
Larval Salivary gland0 ± 00 of 4 1.48None
Larval midgut2 ± 00 of 4 3.78None
Larval tubule1 ± 00 of 4 1.80None
Larval hindgut0 ± 00 of 4 1.61None
Larval fat body1 ± 00 of 4 1.80None
Larval trachea0 ± 00 of 4 1.52None
Larval carcass0 ± 00 of 4 0.57None
S2 cells (growing)0 ± 00 of 4 0.57None
Whole fly0 ± 00 of 4

Looking for FBgn0037576. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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