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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037580 through 18771 annotations produced 1 hits



/// Dipeptidyl aminopeptidase III (CG5618 /// DppIII):

Annotation Number : CG7415
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037580
Gbrowse : chr3R:4170124-4173190 (+) // 100.0 //
Probeset : 1637532_s_at
Accessions : protein= NP_731237; /// NP_731238;, nucleotide= NM_169217; /// NM_169218;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 000
Interpro : 0004177 // aminopeptidase activity // inferred from electronic annotation /// 0004782 // sulfinoalanine decarboxylase ac
FlyMine data for FBgn0037580.
BDGP gene expression has embryonic in situ data for CG7415: 8 pix of staining in 6 body parts.
VDRC has 2 RNAi stocks for FBgn0037580 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain193 ± 54 of 4 0.40Down
Head202 ± 34 of 4 0.40Down
Eye186 ± 104 of 4 0.36Down
Thoracicoabdominal ganglion211 ± 64 of 4 0.40Down
Salivary gland444 ± 184 of 4 0.86Down
Crop300 ± 124 of 4 0.60Down
Midgut306 ± 154 of 4 0.60Down
Tubule679 ± 284 of 4 1.30Up
Hindgut280 ± 34 of 4 0.50Down
Heart348 ± 184 of 4 0.68Down
Fat body390 ± 264 of 4 0.76Down
Ovary770 ± 114 of 4 1.50Up
Testis1085 ± 124 of 4 2.10Up
Male accessory glands715 ± 414 of 4 1.40Up
Virgin spermatheca312 ± 144 of 4 0.61Down
Mated spermatheca290 ± 104 of 4 0.57Down
Adult carcass303 ± 54 of 4 0.60Down
Larval CNS380 ± 164 of 4 0.74Down
Larval Salivary gland1239 ± 674 of 4 2.41Up
Larval midgut358 ± 154 of 4 0.70Down
Larval tubule1143 ± 234 of 4 2.20Up
Larval hindgut518 ± 214 of 4 1.01None
Larval fat body331 ± 344 of 4 0.60Down
Larval trachea428 ± 794 of 4 0.83None
Larval carcass742 ± 334 of 4 1.44Up
S2 cells (growing)351 ± 44 of 4 0.68Down
Whole fly514 ± 124 of 4

Looking for FBgn0037580. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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