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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037590 through 18771 annotations produced 1 hits



Odorant receptor 85b (Or85b):

Annotation Number : CG11735
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037590
Gbrowse : chr3R:4335798-4337080 (-) // 100.0 //
Probeset : 1640812_at
Accessions : protein= NP_524279;, nucleotide= NM_079555;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0003779 // actin binding // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred fr
FlyMine data for FBgn0037590.
VDRC has 2 RNAi stocks for FBgn0037590 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain7 ± 01 of 4 1.40None
Head14 ± 14 of 4 2.70Up
Eye3 ± 11 of 4 0.67None
Thoracicoabdominal ganglion6 ± 20 of 4 1.30None
Salivary gland3 ± 10 of 4 0.74None
Crop4 ± 10 of 4 0.80None
Midgut10 ± 11 of 4 2.10Up
Tubule7 ± 01 of 4 1.40Up
Hindgut6 ± 11 of 4 1.20None
Heart1 ± 00 of 4 0.33Down
Fat body10 ± 40 of 4 1.98None
Ovary4 ± 11 of 4 0.80None
Testis2 ± 00 of 4 0.50Down
Male accessory glands8 ± 11 of 4 1.50None
Virgin spermatheca6 ± 00 of 4 1.27None
Mated spermatheca6 ± 01 of 4 1.29None
Adult carcass6 ± 20 of 4 1.30None
Larval CNS4 ± 12 of 4 0.78None
Larval Salivary gland3 ± 10 of 4 0.73None
Larval midgut7 ± 10 of 4 1.37None
Larval tubule5 ± 22 of 4 1.10None
Larval hindgut4 ± 01 of 4 0.81None
Larval fat body8 ± 11 of 4 1.60None
Larval trachea2 ± 11 of 4 0.53Down
Larval carcass2 ± 10 of 4 0.58None
S2 cells (growing)5 ± 01 of 4 1.01None
Whole fly5 ± 00 of 4

Looking for FBgn0037590. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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