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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037591 through 18771 annotations produced 1 hits



Odorant receptor 85c (Or85c):

Annotation Number : CG17911
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037591
Gbrowse : chr3R:4337455-4338744 (-) // 100.0 //
Probeset : 1631150_at
Accessions : protein= NP_524280;, nucleotide= NM_079556;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0037591.
VDRC has 2 RNAi stocks for FBgn0037591 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 10 of 4 1.50None
Head3 ± 00 of 4 1.50None
Eye0 ± 00 of 4 0.39None
Thoracicoabdominal ganglion3 ± 00 of 4 1.60None
Salivary gland6 ± 20 of 4 2.76None
Crop2 ± 10 of 4 1.30None
Midgut1 ± 00 of 4 0.80None
Tubule3 ± 00 of 4 1.50None
Hindgut4 ± 10 of 4 1.80None
Heart0 ± 00 of 4 0.42None
Fat body4 ± 20 of 4 1.94None
Ovary2 ± 00 of 4 0.90None
Testis3 ± 20 of 4 1.60None
Male accessory glands3 ± 00 of 4 1.40None
Virgin spermatheca3 ± 10 of 4 1.35None
Mated spermatheca5 ± 10 of 4 2.32None
Adult carcass7 ± 20 of 4 3.50None
Larval CNS2 ± 00 of 4 1.31None
Larval Salivary gland3 ± 10 of 4 1.52None
Larval midgut3 ± 00 of 4 1.60None
Larval tubule4 ± 20 of 4 2.20None
Larval hindgut2 ± 10 of 4 1.10None
Larval fat body3 ± 10 of 4 1.60None
Larval trachea1 ± 10 of 4 0.88None
Larval carcass2 ± 00 of 4 1.31None
S2 cells (growing)1 ± 00 of 4 0.85None
Whole fly2 ± 00 of 4

Looking for FBgn0037591. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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