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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037592 through 18771 annotations produced 1 hits



(CG11737):

Annotation Number : CG11737
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037592
Gbrowse : chr3R:4343585-4347103 (+) // 100.0 //
Probeset : 1632034_at
Accessions : protein= NP_649803;, nucleotide= NM_141546;
FlyMine data for FBgn0037592.
BDGP gene expression has embryonic in situ data for CG11737: 8 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0037592 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain122 ± 54 of 4 0.80Down
Head164 ± 84 of 4 1.10None
Eye81 ± 64 of 4 0.56Down
Thoracicoabdominal ganglion129 ± 54 of 4 0.90Down
Salivary gland113 ± 64 of 4 0.77Down
Crop386 ± 214 of 4 2.60Up
Midgut249 ± 54 of 4 1.70Up
Tubule166 ± 44 of 4 1.10Up
Hindgut222 ± 64 of 4 1.50Up
Heart171 ± 44 of 4 1.17Up
Fat body341 ± 194 of 4 2.32Up
Ovary202 ± 24 of 4 1.40Up
Testis205 ± 54 of 4 1.40Up
Male accessory glands93 ± 34 of 4 0.60Down
Virgin spermatheca194 ± 34 of 4 1.32Up
Mated spermatheca180 ± 154 of 4 1.22None
Adult carcass263 ± 44 of 4 1.80Up
Larval CNS100 ± 34 of 4 0.69Down
Larval Salivary gland97 ± 34 of 4 0.66Down
Larval midgut487 ± 1194 of 4 3.31None
Larval tubule751 ± 414 of 4 5.10Up
Larval hindgut168 ± 134 of 4 1.14None
Larval fat body718 ± 604 of 4 4.90Up
Larval trachea129 ± 64 of 4 0.88Down
Larval carcass126 ± 174 of 4 0.86None
S2 cells (growing)132 ± 24 of 4 0.90Down
Whole fly147 ± 24 of 4

Looking for FBgn0037592. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime