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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037683 through 18771 annotations produced 1 hits



(CG18473):

Annotation Number : CG18473
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037683
Gbrowse : chr3R:5189031-5190560 (+) // 100.0 //
Probeset : 1623903_at
Accessions : protein= NP_731339;, nucleotide= NM_169272;
Interpro : "0004063 // aryldialkylphosphatase activity // inferred from sequence or structural similarity /// 0008270 // zinc ion b
FlyMine data for FBgn0037683.
BDGP gene expression has embryonic in situ data for CG18473: 18 pix of staining in 4 body parts.
VDRC has 3 RNAi stocks for FBgn0037683 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain7 ± 01 of 4 0.10Down
Head58 ± 124 of 4 0.80None
Eye66 ± 114 of 4 0.88None
Thoracicoabdominal ganglion5 ± 00 of 4 0.10Down
Salivary gland74 ± 124 of 4 0.98None
Crop19 ± 24 of 4 0.30Down
Midgut10 ± 02 of 4 0.10Down
Tubule4250 ± 3954 of 456.00Up
Hindgut821 ± 344 of 410.80Up
Heart53 ± 44 of 4 0.70Down
Fat body127 ± 304 of 4 1.68Up
Ovary2 ± 00 of 4 0.00Down
Testis6 ± 02 of 4 0.10Down
Male accessory glands9 ± 30 of 4 0.10Down
Virgin spermatheca120 ± 144 of 4 1.58Up
Mated spermatheca84 ± 114 of 4 1.12None
Adult carcass42 ± 14 of 4 0.60Down
Larval CNS15 ± 54 of 4 0.20Down
Larval Salivary gland5 ± 00 of 4 0.07Down
Larval midgut12 ± 02 of 4 0.17Down
Larval tubule2058 ± 1104 of 427.10Up
Larval hindgut3375 ± 504 of 444.49Up
Larval fat body159 ± 274 of 4 2.10None
Larval trachea8 ± 10 of 4 0.11Down
Larval carcass25 ± 34 of 4 0.34Down
S2 cells (growing)90 ± 84 of 4 1.19None
Whole fly75 ± 64 of 4

Looking for FBgn0037683. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime