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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037685 through 18771 annotations produced 1 hits



Odorant receptor 85f (Or85f):

Annotation Number : CG16755
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037685
Gbrowse : chr3R:5223911-5225273 (+) // 100.0 //
Probeset : 1633289_at
Accessions : protein= NP_524289;, nucleotide= NM_079565;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0037685.
BioGrid reports that CG16755 interacts with CG30327 .
VDRC has 3 RNAi stocks for FBgn0037685 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 00 of 4 1.00None
Head4 00 of 4 1.20None
Eye5 12 of 4 1.46None
Thoracicoabdominal ganglion6 22 of 4 1.70None
Salivary gland11 12 of 4 3.14Up
Crop6 11 of 4 1.80None
Midgut10 30 of 4 2.70None
Tubule4 00 of 4 1.10None
Hindgut5 10 of 4 1.40None
Heart3 10 of 4 1.02None
Fat body3 10 of 4 0.81None
Ovary2 00 of 4 0.60None
Testis3 01 of 4 0.80None
Male accessory glands11 21 of 4 3.10Up
Virgin spermatheca4 10 of 4 1.05None
Mated spermatheca5 10 of 4 1.32None
Adult carcass5 10 of 4 1.50None
Larval CNS4 03 of 4 1.07None
Larval Salivary gland8 00 of 4 2.18Up
Larval midgut9 00 of 4 2.52Up
Larval tubule4 10 of 4 1.10None
Larval hindgut6 04 of 4 1.79Up
Larval fat body10 11 of 4 2.90Up
Larval trachea4 21 of 4 1.09None
Larval carcass7 10 of 4 2.08Up
S2 cells (growing)3 00 of 4 0.86None
Whole fly3 00 of 4

Looking for FBgn0037685. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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