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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037686 through 18771 annotations produced 1 hits



anon-fast-evolving-1E8 (RpL34b):

Annotation Number : CG9354
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037686
Gbrowse : chr3R:5226032-5226978 (-) // 100.0 //
Probeset : 1641213_s_at
Accessions : protein= NP_649887; /// NP_731345;, nucleotide= NM_141630; /// NM_169277;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic anno
Interpro : 0003735 // structural constituent of ribosome // inferred from sequence or structural similarity /// 0003735 // structur
FlyMine data for FBgn0037686.
BDGP gene expression has embryonic in situ data for CG9354: 4 pix of staining in 1 body parts.
BioGrid reports that CG9354 interacts with CG9593 .
VDRC has 3 RNAi stocks for FBgn0037686 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1929 ± 434 of 4 0.70Down
Head3130 ± 1494 of 4 1.20None
Eye4422 ± 594 of 4 1.64Up
Thoracicoabdominal ganglion2365 ± 674 of 4 0.90None
Salivary gland5104 ± 1164 of 4 1.89Up
Crop4190 ± 1824 of 4 1.60Up
Midgut3199 ± 654 of 4 1.20Up
Tubule2226 ± 324 of 4 0.80Down
Hindgut3515 ± 744 of 4 1.30Up
Heart4383 ± 2964 of 4 1.63Up
Fat body3692 ± 3784 of 4 1.37Up
Ovary2297 ± 484 of 4 0.90None
Testis521 ± 204 of 4 0.20Down
Male accessory glands5177 ± 1814 of 4 1.90Up
Virgin spermatheca2408 ± 1314 of 4 0.89None
Mated spermatheca2433 ± 584 of 4 0.90None
Adult carcass3410 ± 1504 of 4 1.30Up
Larval CNS1943 ± 1224 of 4 0.72Down
Larval Salivary gland4710 ± 2054 of 4 1.75Up
Larval midgut2003 ± 464 of 4 0.74Down
Larval tubule3178 ± 454 of 4 1.20None
Larval hindgut2871 ± 364 of 4 1.06None
Larval fat body5298 ± 6104 of 4 2.00Up
Larval trachea4288 ± 1694 of 4 1.59Up
Larval carcass3099 ± 1964 of 4 1.15None
S2 cells (growing)3623 ± 864 of 4 1.34Up
Whole fly2696 ± 1594 of 4

Looking for FBgn0037686. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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