Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037714 through 18771 annotations produced 1 hits



(CG9396):

Annotation Number : CG9396
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037714
Gbrowse : chr3R:5396132-5397345 (-) // 100.0 //
Probeset : 1641627_at
Accessions : protein= NP_649912;, nucleotide= NM_141655;
FlyMine data for FBgn0037714.
VDRC has 1 RNAi stocks for FBgn0037714 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain9 ± 23 of 4 0.10Down
Head414 ± 314 of 4 2.50Up
Eye192 ± 454 of 4 1.15None
Thoracicoabdominal ganglion14 ± 21 of 4 0.10Down
Salivary gland738 ± 424 of 4 4.39Up
Crop336 ± 84 of 4 2.00Up
Midgut736 ± 294 of 4 4.40Up
Tubule1778 ± 1654 of 410.60Up
Hindgut102 ± 94 of 4 0.60Down
Heart702 ± 284 of 4 4.18Up
Fat body928 ± 574 of 4 5.53Up
Ovary0 ± 00 of 4 0.00Down
Testis5 ± 00 of 4 0.00Down
Male accessory glands5 ± 20 of 4 0.00Down
Virgin spermatheca632 ± 384 of 4 3.77Up
Mated spermatheca376 ± 224 of 4 2.24Up
Adult carcass541 ± 424 of 4 3.20Up
Larval CNS0 ± 00 of 4 0.00Down
Larval Salivary gland4 ± 10 of 4 0.03Down
Larval midgut136 ± 74 of 4 0.81None
Larval tubule206 ± 374 of 4 1.20None
Larval hindgut14 ± 14 of 4 0.09Down
Larval fat body14 ± 40 of 4 0.10Down
Larval trachea7 ± 82 of 4 0.04Down
Larval carcass7 ± 10 of 4 0.04Down
S2 cells (growing)3 ± 10 of 4 0.02Down
Whole fly168 ± 164 of 4

Looking for FBgn0037714. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime