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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037757 through 18771 annotations produced 1 hits



(CG8516):

Annotation Number : CG8516
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037757
Gbrowse : chr3R:5619045-5622725 (+) // 100.0 //
Probeset : 1640828_at
Accessions : protein= NP_649951;, nucleotide= NM_141694;
FlyMine data for FBgn0037757.
VDRC has 1 RNAi stocks for FBgn0037757 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain61 ± 34 of 4 1.50Up
Head29 ± 23 of 4 0.70None
Eye18 ± 14 of 4 0.46Down
Thoracicoabdominal ganglion43 ± 34 of 4 1.10None
Salivary gland54 ± 54 of 4 1.37None
Crop44 ± 54 of 4 1.10None
Midgut21 ± 13 of 4 0.60Down
Tubule13 ± 03 of 4 0.30Down
Hindgut27 ± 34 of 4 0.70None
Heart17 ± 24 of 4 0.44Down
Fat body27 ± 53 of 4 0.70None
Ovary95 ± 34 of 4 2.40Up
Testis14 ± 04 of 4 0.40Down
Male accessory glands31 ± 24 of 4 0.80None
Virgin spermatheca9 ± 21 of 4 0.23Down
Mated spermatheca8 ± 10 of 4 0.22Down
Adult carcass41 ± 24 of 4 1.00None
Larval CNS40 ± 24 of 4 1.03None
Larval Salivary gland51 ± 14 of 4 1.30None
Larval midgut22 ± 14 of 4 0.58Down
Larval tubule25 ± 24 of 4 0.70Down
Larval hindgut23 ± 14 of 4 0.58Down
Larval fat body13 ± 42 of 4 0.30Down
Larval trachea22 ± 14 of 4 0.57Down
Larval carcass27 ± 34 of 4 0.69None
S2 cells (growing)79 ± 34 of 4 2.01Up
Whole fly39 ± 34 of 4

Looking for FBgn0037757. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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