Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037764 through 18771 annotations produced 1 hits



(CG9459):

Annotation Number : CG9459
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037764
Gbrowse : chr3R:5643223-5644076 (-) // 100.0 //
Probeset : 1634449_at
Accessions : protein= NP_649958;, nucleotide= NM_141701;
Pathway : 0016021 // integral to membrane // inferred from electronic annotation
FlyMine data for FBgn0037764.
Homophila reports that CG9459 is a close match (2e-25) to human gene ADMD;ELOVL4;STGD2;STGD3 (NP_073563), a gene associated with Macular dystrophy, autosomal dominant, chromosome 6-linked, 600110 (3);Stargardt disease 3, 600110 (3).
VDRC has 4 RNAi stocks for FBgn0037764 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 00 of 4 0.00Down
Head2 ± 10 of 4 0.00Down
Eye0 ± 00 of 4 0.01Down
Thoracicoabdominal ganglion6 ± 41 of 4 0.10Down
Salivary gland11 ± 20 of 4 0.10Down
Crop5 ± 20 of 4 0.10Down
Midgut3 ± 10 of 4 0.00Down
Tubule11 ± 31 of 4 0.10Down
Hindgut6 ± 10 of 4 0.10Down
Heart1593 ± 914 of 414.31Up
Fat body1536 ± 1254 of 413.81Up
Ovary2 ± 00 of 4 0.00Down
Testis3 ± 00 of 4 0.00Down
Male accessory glands11 ± 31 of 4 0.10Down
Virgin spermatheca4 ± 10 of 4 0.04Down
Mated spermatheca3 ± 11 of 4 0.03Down
Adult carcass1041 ± 364 of 4 9.40Up
Larval CNS3 ± 10 of 4 0.03Down
Larval Salivary gland2 ± 10 of 4 0.03Down
Larval midgut4 ± 10 of 4 0.04Down
Larval tubule2 ± 10 of 4 0.00Down
Larval hindgut2 ± 00 of 4 0.02Down
Larval fat body5 ± 10 of 4 0.10Down
Larval trachea3 ± 31 of 4 0.04Down
Larval carcass68 ± 64 of 4 0.61None
S2 cells (growing)1 ± 00 of 4 0.01Down
Whole fly111 ± 164 of 4

Looking for FBgn0037764. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime