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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037772 through 18771 annotations produced 1 hits



Serpin 85F (Spn85F):

Annotation Number : CG12807
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037772
Gbrowse : chr3R:5823260-5825501 (+) // 100.0 //
Probeset : 1625495_at
Accessions : protein= NP_649965;, nucleotide= NM_141708;
Interpro : 0004866 // endopeptidase inhibitor activity // inferred from sequence or structural similarity /// 0004867 // serine-typ
FlyMine data for FBgn0037772.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 ± 01 of 4 0.80None
Head6 ± 12 of 4 1.10None
Eye3 ± 10 of 4 0.51None
Thoracicoabdominal ganglion5 ± 10 of 4 0.90None
Salivary gland14 ± 41 of 4 2.49None
Crop4 ± 10 of 4 0.80None
Midgut7 ± 10 of 4 1.20None
Tubule7 ± 00 of 4 1.20None
Hindgut10 ± 14 of 4 1.80Up
Heart6 ± 00 of 4 1.08None
Fat body8 ± 30 of 4 1.49None
Ovary3 ± 10 of 4 0.50None
Testis5 ± 01 of 4 0.90None
Male accessory glands6 ± 20 of 4 1.00None
Virgin spermatheca8 ± 20 of 4 1.39None
Mated spermatheca7 ± 30 of 4 1.27None
Adult carcass9 ± 30 of 4 1.50None
Larval CNS4 ± 01 of 4 0.73Down
Larval Salivary gland15 ± 11 of 4 2.50Up
Larval midgut8 ± 00 of 4 1.36None
Larval tubule6 ± 01 of 4 1.10None
Larval hindgut5 ± 11 of 4 0.85None
Larval fat body10 ± 11 of 4 1.70None
Larval trachea6 ± 30 of 4 1.14None
Larval carcass8 ± 10 of 4 1.43None
S2 cells (growing)5 ± 21 of 4 0.91None
Whole fly6 ± 00 of 4

Looking for FBgn0037772. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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