FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0037778 through 18771 annotations produced 1 hits

mitochondrial transcription factor B2 (mtTFB2):

Annotation Number : CG3910
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037778
Gbrowse : chr3R:5871297-5872987 (+) // 100.0 //
Probeset : 1636340_at
Accessions : protein= NP_649971;, nucleotide= NM_141714;
Pathway : DNA-dependent // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotat
Interpro : 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotati
FlyMine data for FBgn0037778.
BDGP gene expression has embryonic in situ data for CG3910: 12 pix of staining in 3 body parts.
TRiP has 1 RNAi stocks for FBgn0037778 available for purchase.
VDRC has 1 RNAi stocks for FBgn0037778 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	56 ± 3	4 of 4	1.00	None
Head	39 ± 3	4 of 4	0.70	Down
Eye	30 ± 0	4 of 4	0.54	Down
Thoracicoabdominal ganglion	53 ± 3	4 of 4	0.90	None
Salivary gland	39 ± 3	3 of 4	0.70	Down
Crop	58 ± 3	4 of 4	1.00	None
Midgut	42 ± 4	4 of 4	0.80	Down
Tubule	48 ± 3	4 of 4	0.90	Down
Hindgut	43 ± 1	4 of 4	0.80	Down
Heart	36 ± 3	4 of 4	0.65	Down
Fat body	44 ± 7	3 of 4	0.78	None
Ovary	116 ± 2	4 of 4	2.10	Up
Testis	15 ± 1	4 of 4	0.30	Down
Male accessory glands	43 ± 3	4 of 4	0.80	Down
Virgin spermatheca	59 ± 1	4 of 4	1.05	None
Mated spermatheca	65 ± 3	4 of 4	1.15	None
Adult carcass	45 ± 3	4 of 4	0.80	None
Larval CNS	93 ± 9	4 of 4	1.66	Up
Larval Salivary gland	40 ± 1	4 of 4	0.71	Down
Larval midgut	37 ± 1	4 of 4	0.66	Down
Larval tubule	55 ± 3	4 of 4	1.00	None
Larval hindgut	56 ± 1	4 of 4	0.99	None
Larval fat body	36 ± 2	4 of 4	0.60	Down
Larval trachea	43 ± 5	4 of 4	0.77	Down
Larval carcass	51 ± 2	4 of 4	0.90	None
S2 cells (growing)	55 ± 1	4 of 4	0.98	None
Whole fly	56 ± 3	4 of 4

Looking for FBgn0037778. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720