FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0037780 through 18771 annotations produced 1 hits

(CG3925):

Annotation Number : CG3925
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037780
Gbrowse : chr3R:5874887-5877308 (+) // 100.0 //
Probeset : 1625854_at
Accessions : protein= NP_649973;, nucleotide= NM_141716;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0037780.
BDGP gene expression has embryonic in situ data for CG3925: 4 pix of staining in 1 body parts.
Homophila reports that CG3925 is a close match (9e-35) to human gene CRBN;MRT2A (NP_057386), a gene associated with Mental retardation, autosomal recessive 2A, 607417 (3).
BioGrid reports that CG3925 interacts with CG9480 CG9573 .
VDRC has 3 RNAi stocks for FBgn0037780 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	197 ± 5	4 of 4	2.20	Up
Head	108 ± 6	4 of 4	1.20	None
Eye	138 ± 4	4 of 4	1.55	Up
Thoracicoabdominal ganglion	166 ± 2	4 of 4	1.90	Up
Salivary gland	89 ± 3	4 of 4	1.00	None
Crop	75 ± 4	4 of 4	0.80	None
Midgut	36 ± 2	4 of 4	0.40	Down
Tubule	90 ± 4	4 of 4	1.00	None
Hindgut	83 ± 4	4 of 4	0.90	None
Heart	70 ± 4	4 of 4	0.79	Down
Fat body	71 ± 7	4 of 4	0.80	Down
Ovary	111 ± 1	4 of 4	1.20	Up
Testis	163 ± 6	4 of 4	1.80	Up
Male accessory glands	77 ± 5	4 of 4	0.90	None
Virgin spermatheca	74 ± 1	4 of 4	0.83	Down
Mated spermatheca	56 ± 2	4 of 4	0.63	Down
Adult carcass	92 ± 6	4 of 4	1.00	None
Larval CNS	92 ± 3	4 of 4	1.04	None
Larval Salivary gland	43 ± 1	4 of 4	0.49	Down
Larval midgut	41 ± 5	4 of 4	0.46	Down
Larval tubule	112 ± 2	4 of 4	1.30	Up
Larval hindgut	62 ± 6	4 of 4	0.70	Down
Larval fat body	112 ± 3	4 of 4	1.30	Up
Larval trachea	41 ± 2	4 of 4	0.46	Down
Larval carcass	64 ± 8	4 of 4	0.72	None
S2 cells (growing)	56 ± 4	4 of 4	0.63	Down
Whole fly	89 ± 2	4 of 4

Looking for FBgn0037780. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720