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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037802 through 18771 annotations produced 1 hits



Sirt6 (Sirt6):

Annotation Number : CG6284
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037802
Gbrowse : chr3R:6086508-6087462 (-) // 100.0 //
Probeset : 1630622_at
Accessions : protein= NP_649990;, nucleotide= NM_141733;
Interpro : "0008270 // zinc ion binding // inferred from electronic annotation /// 0016811 // hydrolase activity
FlyMine data for FBgn0037802.
TRiP has 3 RNAi stocks for FBgn0037802 available for purchase.
VDRC has 1 RNAi stocks for FBgn0037802 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain28 ± 04 of 4 0.60Down
Head18 ± 14 of 4 0.40Down
Eye12 ± 14 of 4 0.27Down
Thoracicoabdominal ganglion20 ± 14 of 4 0.50Down
Salivary gland21 ± 52 of 4 0.48Down
Crop22 ± 14 of 4 0.50Down
Midgut13 ± 04 of 4 0.30Down
Tubule12 ± 13 of 4 0.30Down
Hindgut16 ± 14 of 4 0.40Down
Heart10 ± 12 of 4 0.24Down
Fat body13 ± 12 of 4 0.30Down
Ovary101 ± 64 of 4 2.30Up
Testis6 ± 02 of 4 0.10Down
Male accessory glands17 ± 34 of 4 0.40Down
Virgin spermatheca12 ± 04 of 4 0.28Down
Mated spermatheca18 ± 14 of 4 0.41Down
Adult carcass11 ± 40 of 4 0.30Down
Larval CNS40 ± 14 of 4 0.91None
Larval Salivary gland23 ± 14 of 4 0.52Down
Larval midgut12 ± 12 of 4 0.29Down
Larval tubule18 ± 34 of 4 0.40Down
Larval hindgut17 ± 04 of 4 0.38Down
Larval fat body11 ± 13 of 4 0.30Down
Larval trachea34 ± 14 of 4 0.78Down
Larval carcass14 ± 14 of 4 0.33Down
S2 cells (growing)38 ± 24 of 4 0.87None
Whole fly44 ± 24 of 4

Looking for FBgn0037802. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime