Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037810 through 18771 annotations produced 1 hits



/// slender lobes (CG12592 /// sle):

Annotation Number : CG12819
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037810 /// FBgn0037811
Gbrowse : chr3R:6158892-6163995 (+) // 100.0 //
Probeset : 1624252_s_at
Accessions : protein= NP_731472; /// NP_731473; /// NP_731474;, nucleotide= NM_169338; /// NM_169339; /// NM_169340;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 00057
FlyMine data for FBgn0037810 /// FBgn0037811.
BioGrid reports that CG12819 interacts with CG13526 CG4167 .


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain119 ± 34 of 4 0.30Down
Head48 ± 24 of 4 0.10Down
Eye61 ± 74 of 4 0.17Down
Thoracicoabdominal ganglion142 ± 14 of 4 0.40Down
Salivary gland49 ± 53 of 4 0.14Down
Crop53 ± 44 of 4 0.10Down
Midgut62 ± 34 of 4 0.20Down
Tubule21 ± 52 of 4 0.10Down
Hindgut57 ± 14 of 4 0.20Down
Heart39 ± 34 of 4 0.11Down
Fat body46 ± 104 of 4 0.13Down
Ovary829 ± 54 of 4 2.30Up
Testis949 ± 334 of 4 2.60Up
Male accessory glands248 ± 44 of 4 0.70Down
Virgin spermatheca27 ± 44 of 4 0.08Down
Mated spermatheca38 ± 34 of 4 0.10Down
Adult carcass49 ± 93 of 4 0.10Down
Larval CNS629 ± 94 of 4 1.73Up
Larval Salivary gland138 ± 134 of 4 0.38Down
Larval midgut93 ± 54 of 4 0.26Down
Larval tubule57 ± 24 of 4 0.20Down
Larval hindgut97 ± 44 of 4 0.27Down
Larval fat body201 ± 834 of 4 0.60None
Larval trachea279 ± 264 of 4 0.77Down
Larval carcass139 ± 154 of 4 0.38Down
S2 cells (growing)634 ± 294 of 4 1.74Up
Whole fly364 ± 244 of 4

Looking for FBgn0037810. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime